RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 KLF13Q9Y2Y9 288 aaPredicted RBP13.58□□□□□ -0.24
NCK1-202ENST00000460960 SAGE2PA6NJ88 616 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 KLRC4-KLRK1H3BQV0 150 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 FCHO1O14526 889 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 HDAC3O15379 428 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 AKAP10O43572 662 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 TOXO94900 526 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 SNUPNO95149 360 aaKnown RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 IFNA16P05015 189 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 HOXB4P17483 251 aaPredicted RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 IGFBP2P18065 325 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 MSX1P28360 303 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 EPHA3P29320 983 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 TLX1P31314 330 aaPredicted RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 GPR85P60893 370 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 TRA2BP62995 288 aaKnown RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 C2orf80Q0P641 193 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 PMPCAQ10713 525 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 STX4Q12846 297 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 ZNF385BQ569K4 471 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 IL23RQ5VWK5 629 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 SULF2Q8IWU5 870 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 DMRTC2Q8IXT2 367 aaPredicted RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 LIX1Q8N485 282 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 RPRMLQ8N4K4 120 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 FNDC5Q8NAU1 212 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 CHDHQ8NE62 594 aaPredicted RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 FAM76AQ8TAV0 307 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 ELP5Q8TE02 316 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 EXOSC8Q96B26 276 aaKnown RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 CNRIP1Q96F85 164 aaPredicted RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 PPP3R2Q96LZ3 170 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 C7orf26Q96N11 449 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 ZNF681Q96N22 645 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 DEFB126Q9BYW3 111 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 TP63Q9H3D4 680 aaPredicted RBP13.57□□□□□ -0.24
NCK1-202ENST00000460960 MYNNQ9NPC7 610 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 VTI1BQ9UEU0 232 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 HRH3Q9Y5N1 445 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 AKAP6Q13023 2319 aa13.57□□□□□ -0.24
NCK1-202ENST00000460960 C1orf226A1L170 272 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 PEX1O43933 1283 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 PRKNO60260 465 aaPredicted RBP13.56□□□□□ -0.24
NCK1-202ENST00000460960 ERAL1O75616 437 aaKnown RBP13.56□□□□□ -0.24
NCK1-202ENST00000460960 ALDOCP09972 364 aaKnown RBP13.56□□□□□ -0.24
NCK1-202ENST00000460960 CT62P0C5K7 136 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 DRD2P14416 443 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 ALOX15P16050 662 aaPredicted RBP13.56□□□□□ -0.24
NCK1-202ENST00000460960 FEN1P39748 380 aaKnown RBP13.56□□□□□ -0.24
NCK1-202ENST00000460960 HLCSP50747 726 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 GPR143P51810 404 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 GYS2P54840 703 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 DIO3P55073 304 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 MLF1P58340 268 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 PTGR1Q14914 329 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 LTB4RQ15722 352 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 MPEG1Q2M385 716 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 ATP6AP1LQ52LC2 224 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 RGS9BPQ6ZS82 235 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 LARP4Q71RC2 724 aaKnown RBP eCLIP13.56□□□□□ -0.24
NCK1-202ENST00000460960 ZNF227Q86WZ6 799 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 TGIF2LYQ8IUE0 185 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 TMEM156Q8N614 296 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 SIMC1Q8NDZ2 872 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 OR5M3Q8NGP4 307 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 OR10Q1Q8NGQ4 319 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 PIWIL2Q8TC59 973 aaKnown RBP13.56□□□□□ -0.24
NCK1-202ENST00000460960 KLHL29Q96CT2 875 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 MARK4Q96L34 752 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 OR52B2Q96RD2 323 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 CCT7Q99832 543 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 DEFB127Q9H1M4 99 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 WDR41Q9HAD4 459 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 ADAP2Q9NPF8 381 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 CCM2LQ9NUG4 571 aaPredicted RBP13.56□□□□□ -0.24
NCK1-202ENST00000460960 KCNN3Q9UGI6 736 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 USH1CQ9Y6N9 552 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 ABCA4P78363 2273 aa13.56□□□□□ -0.24
NCK1-202ENST00000460960 DNAJC13O75165 2243 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 C17orf105B2RV13 164 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 CLPSP04118 112 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 G6PDP11413 515 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 KLK2P20151 261 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 DDCP20711 480 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 EFNA1P20827 205 aaPredicted RBP13.55□□□□□ -0.24
NCK1-202ENST00000460960 PIK3R1P27986 724 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 STT3AP46977 705 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 XKP51811 444 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 NUP107P57740 925 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 TFF3Q07654 80 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 SERTAD2Q14140 314 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 ELAVL1Q15717 326 aaKnown RBP13.55□□□□□ -0.24
NCK1-202ENST00000460960 CEBPEQ15744 281 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 CMPK2Q5EBM0 449 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 TMEM198Q66K66 360 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 ARHGAP11AQ6P4F7 1023 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 CYP4Z2PQ8N1L4 340 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 KRTCAP2Q8N6L1 136 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 APCDD1LQ8NCL9 501 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms