RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TIMP4Q99727 224 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 PRODH2Q9UF12 536 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 PLLPQ9Y342 182 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 L3MBTL1Q9Y468 752 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 RIPK2O43353 540 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 EPPINO95925 133 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 RHOXF2BP0C7M4 288 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 ATP5F1P24539 256 aaPredicted RBP20.82■□□□□ 0.92
PTPN4-207ENST00000460162 PTPN6P29350 595 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 HMOX2P30519 316 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 DUSP2Q05923 314 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 TIGD3Q6B0B8 471 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 SPNS3Q6ZMD2 512 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 NUP54Q7Z3B4 507 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 SLC22A9Q8IVM8 553 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 GBP7Q8N8V2 638 aaPredicted RBP20.82■□□□□ 0.92
PTPN4-207ENST00000460162 OR52R1Q8NGF1 315 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 ZNF675Q8TD23 568 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 HGDQ93099 445 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 OMA1Q96E52 524 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 ZNF681Q96N22 645 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 GNRHR2Q96P88 292 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 OSBPL11Q9BXB4 747 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 FETUBQ9UGM5 382 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 UTS2RQ9UKP6 389 aa20.82■□□□□ 0.92
PTPN4-207ENST00000460162 SPG11Q96JI7 2443 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 DVL2O14641 736 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 PCDH7O60245 1069 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 DLX3O60479 287 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 ULK1O75385 1050 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 ZWINTO95229 277 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 ESRRBO95718 433 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 IMPDH1P20839 514 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 TIMP3P35625 211 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 SOX18P35713 384 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 DLX5P56178 289 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 LCP2Q13094 533 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 SNTA1Q13424 505 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 LTB4RQ15722 352 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 SPIN4Q56A73 249 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 FAM219BQ5XKK7 198 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 VASNQ6EMK4 673 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 SLC30A6Q6NXT4 461 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 IFT20Q8IY31 132 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 SAMD14Q8IZD0 417 aaPredicted RBP20.81■□□□□ 0.92
PTPN4-207ENST00000460162 RELL2Q8NC24 303 aaPredicted RBP20.81■□□□□ 0.92
PTPN4-207ENST00000460162 ADCY4Q8NFM4 1077 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 ACMSDQ8TDX5 336 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 ERP27Q96DN0 273 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 L3HYPDHQ96EM0 354 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 ACPTQ9BZG2 426 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 HEY2Q9UBP5 337 aa20.81■□□□□ 0.92
PTPN4-207ENST00000460162 FRG2CA6NGY1 282 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 GNB5O14775 395 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 SNPHO15079 494 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 TO15178 435 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 ENO1P06733 434 aaKnown RBP20.8■□□□□ 0.92
PTPN4-207ENST00000460162 IL3P08700 152 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 DRD2P14416 443 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 DRD5P21918 477 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 CEACAM8P31997 349 aaPredicted RBP20.8■□□□□ 0.92
PTPN4-207ENST00000460162 PPICP45877 212 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 ASCL1P50553 236 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 PRKAA2P54646 552 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 PKNOX1P55347 436 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 MRPS35P82673 323 aaKnown RBP20.8■□□□□ 0.92
PTPN4-207ENST00000460162 TOMM20Q15388 145 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 ZNF628Q5EBL2 1059 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 ARSKQ6UWY0 536 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 ANGPTL8Q6UXH0 198 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 CEP112Q8N8E3 955 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 NAXEQ8NCW5 288 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 OR1J4Q8NGS1 313 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 METTL6Q8TCB7 284 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 SHCBP1LQ9BZQ2 653 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 PSMC3IPQ9P2W1 217 aaPredicted RBP20.8■□□□□ 0.92
PTPN4-207ENST00000460162 SLC6A5Q9Y345 797 aa20.8■□□□□ 0.92
PTPN4-207ENST00000460162 GNG14A0A1W2PPG7 69 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 CCDC151A5D8V7 595 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 BCAS2O75934 225 aaPredicted RBP20.79■□□□□ 0.92
PTPN4-207ENST00000460162 GSTA1P08263 222 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 PCSK2P16519 638 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 EMDP50402 254 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 HTR6P50406 440 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 PSPHP78330 225 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 ACSM2AQ08AH3 577 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 TRMT12Q53H54 448 aaKnown RBP20.79■□□□□ 0.92
PTPN4-207ENST00000460162 NSUN5P2Q63ZY6 315 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 ACSM2BQ68CK6 577 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 FAM180BQ6P0A1 224 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 SIMC1Q8NDZ2 872 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 TNIP2Q8NFZ5 429 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 LRRC46Q96FV0 321 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 BTBD9Q96Q07 612 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 NODALQ96S42 347 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 UGT2B28Q9BY64 529 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 PFDN4Q9NQP4 134 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 GIMAP4Q9NUV9 329 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 KLRF1Q9NZS2 232 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 ZNF629Q9UEG4 869 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms