RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 PRKAG1P54619 331 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 TXNL4AP83876 142 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 LASP1Q14847 261 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 EXT1Q16394 746 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 DNAL1Q4LDG9 190 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 PLAG1Q6DJT9 500 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 ZCCHC12Q6PEW1 402 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 RNF111Q6ZNA4 994 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 SZRD1Q7Z422 152 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 RNF130Q86XS8 419 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 SLC15A3Q8IY34 581 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 C16orf52Q8NHV5 167 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 VMP1Q96GC9 406 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 NAF1Q96HR8 494 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 SLC35G5Q96KT7 338 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 VSTM2LQ96N03 204 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 LRMDAQ9H2I8 198 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 KAT8Q9H7Z6 458 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 TMEM181Q9P2C4 612 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 COPS7AQ9UBW8 275 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 PRODH2Q9UF12 536 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 BCAP29Q9UHQ4 241 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 ZNF223Q9UK11 482 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 FBXL4Q9UKA2 621 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 HEMK1Q9Y5R4 338 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 FRYQ5TBA9 3013 aa15.42■□□□□ 0.06
CCDC90B-202ENST00000455220 NSG1A0A0A6YYJ2 146 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 OR6C76A6NM76 312 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 GYG2O15488 501 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 MAN2A2P49641 1150 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 PRIM2P49643 509 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 FADDQ13158 208 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 RGNQ15493 299 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 COX20Q5RI15 118 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 ASRGL1Q7L266 308 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 C10orf111Q8N326 155 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 M1APQ8TC57 530 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 PNPT1Q8TCS8 783 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 ELP5Q8TE02 316 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 THUMPD3Q9BV44 507 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 ACTRT3Q9BYD9 372 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 CFL2Q9Y281 166 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 AP3M1Q9Y2T2 418 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 PEX12O00623 359 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 NME4O00746 187 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 BMP2P12643 396 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 MATN1P21941 496 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 RPS26P62854 115 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 ATP1A4Q13733 1029 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 EBPQ15125 230 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 CDC73Q6P1J9 531 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 ANGPTL8Q6UXH0 198 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 ERMP1Q7Z2K6 904 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 C9orf40Q8IXQ3 194 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 LGI4Q8N135 537 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 AMER2Q8N7J2 671 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 CDRT4Q8N9R6 151 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 OR8K3Q8NH51 312 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 C16orf58Q96GQ5 468 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 LMF2Q9BU23 707 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 FOLH1BQ9HBA9 442 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 ZNF160Q9HCG1 818 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 MMP25Q9NPA2 562 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 EQTNQ9NQ60 294 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 GIN1Q9NXP7 522 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 PRPF19Q9UMS4 504 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 FAF1Q9UNN5 650 aaPredicted RBP15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 DTX4Q9Y2E6 619 aa15.41■□□□□ 0.06
CCDC90B-202ENST00000455220 MED19A0JLT2 244 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 TTC36A6NLP5 189 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 ZNF891A8MT65 544 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 KLK10O43240 276 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 ASNA1O43681 348 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 NME6O75414 186 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 GZMMP51124 257 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 CLCN2P51788 898 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 ZNF155Q12901 538 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 MYBPC3Q14896 1274 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 BTBD16Q32M84 506 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 BNC2Q6ZN30 1099 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 NET1Q7Z628 596 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 SERPINA11Q86U17 422 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 CALHM3Q86XJ0 350 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 ARHGAP24Q8N264 748 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 HORMAD2Q8N7B1 307 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 THAP4Q8WY91 577 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 CCNL2Q96S94 520 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 CDRT15Q96T59 188 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 OR51I1Q9H343 314 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 WDR70Q9NW82 654 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 L3MBTL1Q9Y468 752 aa15.4■□□□□ 0.06
CCDC90B-202ENST00000455220 EFSO43281 561 aa15.39■□□□□ 0.05
CCDC90B-202ENST00000455220 TNFRSF21O75509 655 aa15.39■□□□□ 0.05
CCDC90B-202ENST00000455220 NKX2-2O95096 273 aa15.39■□□□□ 0.05
CCDC90B-202ENST00000455220 ACP2P11117 423 aa15.39■□□□□ 0.05
CCDC90B-202ENST00000455220 ICAM2P13598 275 aa15.39■□□□□ 0.05
CCDC90B-202ENST00000455220 ETFAP13804 333 aa15.39■□□□□ 0.05
CCDC90B-202ENST00000455220 EIF2S3P41091 472 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-202ENST00000455220 CRATP43155 626 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms