RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 BCAP29Q9UHQ4 241 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 MRPS7Q9Y2R9 242 aaKnown RBP4.35□□□□□ -1.71
CUL3-208ENST00000454323 KLHDC2Q9Y2U9 406 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 ASB3Q9Y575 518 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 DDX49Q9Y6V7 483 aaKnown RBP4.35□□□□□ -1.71
CUL3-208ENST00000454323 NEDD4P46934 1319 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 KIF7Q2M1P5 1343 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 ADGRB1O14514 1584 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 AKAP12Q02952 1782 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 TUBGCP6Q96RT7 1819 aa4.35□□□□□ -1.71
CUL3-208ENST00000454323 MSGN1A6NI15 193 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 UBXN8O00124 270 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 KLF11O14901 512 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 GPRIN2O60269 458 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 KRT36O76013 467 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 FGF19O95750 216 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 HPRP00739 348 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 NGFP01138 241 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 EDN1P05305 212 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 CA3P07451 260 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 HMBSP08397 361 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 IQCF3P0C7M6 154 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 PAX1P15863 534 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 SLC1A6P48664 564 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 NPY2RP49146 381 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 UBE2HP62256 183 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 BTG1P62324 171 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 CDR2Q01850 454 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 ITPK1Q13572 414 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 BTG3Q14201 252 aaPredicted RBP4.34□□□□□ -1.71
CUL3-208ENST00000454323 CCDC6Q16204 474 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 CLPPQ16740 277 aaPredicted RBP4.34□□□□□ -1.71
CUL3-208ENST00000454323 LRIT3Q3SXY7 679 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 CCDC152Q4G0S7 254 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 FAM106AQ4KMX7 169 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 CFAP157Q5JU67 520 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 ARHGEF16Q5VV41 709 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 SLC39A4Q6P5W5 647 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 KLHDC9Q8NEP7 349 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 STEAP2Q8NFT2 490 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 OR13A1Q8NGR1 328 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 SUSD6Q92537 303 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 SENP5Q96HI0 755 aaPredicted RBP4.34□□□□□ -1.71
CUL3-208ENST00000454323 PCED1BQ96HM7 432 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 C4orf36Q96KX1 117 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 TTC25Q96NG3 672 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 TCHPQ9BT92 498 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 C1QTNF4Q9BXJ3 329 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 CXXC4Q9H2H0 198 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 BICC1Q9H694 974 aaKnown RBP4.34□□□□□ -1.71
CUL3-208ENST00000454323 ATP13A3Q9H7F0 1226 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 CALHM2Q9HA72 323 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 S100A14Q9HCY8 104 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 ZNF490Q9ULM2 529 aaPredicted RBP4.34□□□□□ -1.71
CUL3-208ENST00000454323 RNF115Q9Y4L5 304 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 TNRC6CQ9HCJ0 1690 aaKnown RBP4.34□□□□□ -1.71
CUL3-208ENST00000454323 KIF1BO60333 1816 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 SCN5AQ14524 2016 aa4.34□□□□□ -1.71
CUL3-208ENST00000454323 COL18A1P39060 1754 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 SF3B1O75533 1304 aaKnown RBP eCLIP4.33□□□□□ -1.72
CUL3-208ENST00000454323 TTC21BQ7Z4L5 1316 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 AP3B1O00203 1094 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 LRCH4O75427 683 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 NDUFA7O95182 113 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 SEC24AO95486 1093 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 GOT2P00505 430 aaKnown RBP4.33□□□□□ -1.72
CUL3-208ENST00000454323 FAM157CP0CG43 387 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 SLC2A2P11168 524 aaPredicted RBP4.33□□□□□ -1.72
CUL3-208ENST00000454323 AADACP22760 399 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 MARK3P27448 753 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 TMOD1P28289 359 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 PPP2R1AP30153 589 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 AXLP30530 894 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 FEN1P39748 380 aaKnown RBP4.33□□□□□ -1.72
CUL3-208ENST00000454323 PTGFRP43088 359 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 DHPSP49366 369 aaPredicted RBP4.33□□□□□ -1.72
CUL3-208ENST00000454323 BACE1P56817 501 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 PDK4Q16654 411 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 SPANXN4Q5MJ08 99 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 CEP85LQ5SZL2 805 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 NIPAL3Q6P499 406 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 CBLN3Q6UW01 205 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 PRSS57Q6UWY2 283 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 LPCAT2Q7L5N7 544 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 LHFPL4Q7Z7J7 247 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 ITIH5Q86UX2 942 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 ZNF679Q8IYX0 411 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 PARP8Q8N3A8 854 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 ZNF397Q8NF99 534 aaPredicted RBP4.33□□□□□ -1.72
CUL3-208ENST00000454323 DMBX1Q8NFW5 382 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 GOLGA5Q8TBA6 731 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 GIPC3Q8TF64 312 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 DYRK2Q92630 601 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 OMA1Q96E52 524 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 INPP4AQ96PE3 977 aaPredicted RBP4.33□□□□□ -1.72
CUL3-208ENST00000454323 ACCSQ96QU6 501 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 TESK2Q96S53 571 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 RBM24Q9BX46 236 aaKnown RBP4.33□□□□□ -1.72
CUL3-208ENST00000454323 RAB11FIP5Q9BXF6 653 aa4.33□□□□□ -1.72
CUL3-208ENST00000454323 TDRD1Q9BXT4 1180 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms