RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 PCNAP12004 261 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 BGNP21810 368 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 HIST1H1TP22492 207 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 CPN2P22792 545 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TCEA1P23193 301 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 ATP5F1P24539 256 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 CTSSP25774 331 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 SSTR4P31391 388 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TIMP3P35625 211 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 CPOXP36551 454 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 STT3AP46977 705 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 CDK9P50750 372 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 PRKAA2P54646 552 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 NAGLUP54802 743 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 NR1H2P55055 460 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 HNRNPH2P55795 449 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 IGLV3-21P80748 117 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 CDKL1Q00532 357 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 GUCY1A3Q02108 690 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 SRYQ05066 204 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 SERTAD2Q14140 314 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 ZNF267Q14586 743 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 EBPQ15125 230 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TOMM20Q15388 145 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 NNATQ16517 81 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 PFKFB4Q16877 469 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TTC19Q6DKK2 380 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 VASNQ6EMK4 673 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 KLC3Q6P597 504 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 ZCCHC23Q6ZST2 131 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 FRA10AC1Q70Z53 315 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 YTHDF3Q7Z739 585 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 ADAMTSL2Q86TH1 951 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 P3H2Q8IVL5 708 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 KRT78Q8N1N4 520 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 PTGR2Q8N8N7 351 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 MAPK1IP1LQ8NDC0 245 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TTLQ8NG68 377 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 MBD3L2Q8NHZ7 208 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 SLC22A8Q8TCC7 542 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 DIO2Q92813 273 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 INTS12Q96CB8 462 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 PHF21BQ96EK2 531 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 FBXL20Q96IG2 436 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 ZNF597Q96LX8 424 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 NSUN5Q96P11 429 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 KCNC2Q96PR1 638 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TMEM237Q96Q45 408 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 HS3ST6Q96QI5 342 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TUBA1CQ9BQE3 449 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 G6PC3Q9BUM1 346 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 GATA5Q9BWX5 397 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 MS4A8Q9BY19 250 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 PRDM14Q9GZV8 571 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 UBQLN3Q9H347 655 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 CNOT10Q9H9A5 744 aaKnown RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 UBTD1Q9HAC8 227 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 ZBTB26Q9HCK0 441 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 LYRM4Q9HD34 91 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 PRM3Q9NNZ6 103 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 DNAJC11Q9NVH1 559 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 OXSMQ9NWU1 459 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TEX10Q9NXF1 929 aaPredicted RBP6.41□□□□□ -1.38
CHEK2-220ENST00000454252 WWOXQ9NZC7 414 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 NUDT4Q9NZJ9 180 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 EHD3Q9NZN3 535 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 TRPS1Q9UHF7 1281 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 EDARQ9UNE0 448 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 DTX4Q9Y2E6 619 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 C15orf41Q9Y2V0 281 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 NPFFR2Q9Y5X5 522 aa6.41□□□□□ -1.38
CHEK2-220ENST00000454252 KIAA1549Q9HCM3 1950 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 TLN2Q9Y4G6 2542 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 A0A088AWK7 358 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 CCDC189A1A4V9 331 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 DEFB108AA8MXU0 73 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 POLR3GO15318 223 aaPredicted RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 ITM2AO43736 263 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 TMPRSS11DO60235 418 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 TRIM13O60858 407 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 SMPD2O60906 423 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 EEDO75530 441 aaKnown RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 LYPLA1O75608 230 aaPredicted RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 GBAP04062 536 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 HPNP05981 417 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 RPS17P08708 135 aaKnown RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 CT62P0C5K7 136 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 TMIGD3P0DMS9 266 aaPredicted RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 MYL2P10916 166 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 TSPAN8P19075 237 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 TAC1P20366 129 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 IMPDH1P20839 514 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 ZNF10P21506 573 aaPredicted RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 CCKARP32238 428 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 GGT5P36269 586 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 PEX19P40855 299 aa6.4□□□□□ -1.38
CHEK2-220ENST00000454252 MDH1P40925 334 aaKnown RBP6.4□□□□□ -1.38
CHEK2-220ENST00000454252 SSR2P43308 183 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms