RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 IFNW1P05000 195 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 NCBP2P52298 156 aaKnown RBP eCLIP10.07□□□□□ -0.86e-6■■□□□ 11.7
PKP4-206ENST00000452162 DUSP2Q05923 314 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 PERM1Q5SV97 790 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 ENTHD1Q8IYW4 607 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 SRFBP1Q8NEF9 429 aaKnown RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 SUN3Q8TAQ9 357 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 SFXN5Q8TD22 340 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 APH1BQ8WW43 257 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 CNRIP1Q96F85 164 aaPredicted RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 FAM210AQ96ND0 272 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 BBS4Q96RK4 519 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 NIPSNAP1Q9BPW8 284 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 OR51I1Q9H343 314 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 SRMSQ9H3Y6 488 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 ERVK-18Q9QC07 812 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 TPRKBQ9Y3C4 175 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 HEMK1Q9Y5R4 338 aaPredicted RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 WDFY3Q8IZQ1 3526 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 MDC1Q14676 2089 aaKnown RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 ASPMQ8IZT6 3477 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 ARRDC5A6NEK1 342 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 TMX2-CTNND1H3BSU7 103 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 PCDH17O14917 1159 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 DKK1O94907 266 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 CDK4P11802 303 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 F3P13726 295 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 CBLP22681 906 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 GPC1P35052 558 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 KRT20P35900 424 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 GGT2P36268 569 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 MAGEA8P43361 318 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 LIM2P55344 173 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 RAB8AP61006 207 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 STXBP1P61764 594 aaKnown RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 RPS15AP62244 130 aaKnown RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 SMN1Q16637 294 aaKnown RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 KIF26BQ2KJY2 2108 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 C14orf28Q4W4Y0 310 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 C18orf63Q68DL7 685 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 SLC48A1Q6P1K1 146 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 Q6ZPB1 254 aaPredicted RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 C17orf82Q86X59 251 aaPredicted RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 SLC44A2Q8IWA5 706 aaPredicted RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 ARL14Q8N4G2 192 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 OR9Q2Q8NGE9 314 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 IFI44Q8TCB0 444 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 NT5CQ8TCD5 201 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 UBE2FQ969M7 185 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 ZCCHC3Q9NUD5 404 aaKnown RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 P2RX2Q9UBL9 471 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 FBXW2Q9UKT8 454 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 RNF6Q9Y252 685 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 FAM32AQ9Y421 112 aaKnown RBP10.07□□□□□ -0.8
PKP4-206ENST00000452162 PCDHGA10Q9Y5H3 936 aa10.07□□□□□ -0.8
PKP4-206ENST00000452162 OR2A25A4D2G3 310 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 FFAR1O14842 300 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 ZW10O43264 779 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 PROM1O43490 865 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 SLC28A2O43868 658 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 GADD45GO95257 159 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 OR12D1P0DN82 309 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 KCNJ5P48544 419 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 KHKP50053 298 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 DUSP3P51452 185 aaPredicted RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 GP2P55259 537 aaKnown RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 CLDN6P56747 220 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 EMX1Q04741 257 aaPredicted RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 KIR2DS3Q14952 304 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 GPR19Q15760 415 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 SYPL1Q16563 259 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 ZNF750Q32MQ0 723 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 DHRS13Q6UX07 377 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 OR5D16Q8NGK9 328 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 SLC37A2Q8TED4 501 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 FAR1Q8WVX9 515 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 GAL3ST3Q96A11 431 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 FKBP10Q96AY3 582 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 SLC22A18Q96BI1 424 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 OR2A14Q96R47 310 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 TREX2Q9BQ50 279 aaPredicted RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 RHNO1Q9BSD3 238 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 SEMA3GQ9NS98 782 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 LYARQ9NX58 379 aaKnown RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 SCN3BQ9NY72 215 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 GPC6Q9Y625 555 aaPredicted RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 RNF215Q9Y6U7 377 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 A0A1W2PPW3 197 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 A0A1W2PS29 197 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 MRPS14O60783 128 aaKnown RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 NOL3O60936 208 aaKnown RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 SEMA7AO75326 666 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 ERAL1O75616 437 aaKnown RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 RFPL3O75679 317 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 INMTO95050 263 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 CCNB2O95067 398 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 PTGER1P34995 402 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 SNRPNP63162 240 aaKnown RBP10.06□□□□□ -0.8
PKP4-206ENST00000452162 TGM3Q08188 693 aa10.06□□□□□ -0.8
PKP4-206ENST00000452162 GANABQ14697 944 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms