RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PLOD2O00469 737 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 RFXANKO14593 260 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 PLOD3O60568 738 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 ZFAND5O76080 213 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 ANP32DO95626 131 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 ABCB1P08183 1280 aaPredicted RBP12.09□□□□□ -0.47
VPS33A-202ENST00000451053 FAM87AP0C7U9 286 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 HBA1P69905 142 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 RNF4P78317 190 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 H3F3CQ6NXT2 135 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 SLC2A7Q6PXP3 512 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 HSDL2Q6YN16 418 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 C16orf47Q6ZP98 133 aaPredicted RBP12.09□□□□□ -0.47
VPS33A-202ENST00000451053 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 RETREG3Q86VR2 466 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 PGAM4Q8N0Y7 254 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 OR2L13Q8N349 312 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 RBM15BQ8NDT2 890 aaKnown RBP12.09□□□□□ -0.47
VPS33A-202ENST00000451053 OR7G1Q8NGA0 311 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 LRRC58Q96CX6 371 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 CCDC115Q96NT0 180 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 PANX1Q96RD7 426 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 ARHGAP9Q9BRR9 750 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 CXorf36Q9H7Y0 433 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 LIN28AQ9H9Z2 209 aaKnown RBP12.09□□□□□ -0.47
VPS33A-202ENST00000451053 NEUROD4Q9HD90 331 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 TAS2R1Q9NYW7 299 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 PRPF19Q9UMS4 504 aaKnown RBP12.09□□□□□ -0.47
VPS33A-202ENST00000451053 ERVK-11Q9UQG0 969 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 DTX4Q9Y2E6 619 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 A0A087WV62 115 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 OR6C76A6NM76 312 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 K7EM74 188 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 UPK1AO00322 258 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 PRAMEF2O60811 474 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 SLITRK5O94991 958 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 CPSF4O95639 269 aaKnown RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 PDGFAP04085 211 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 EMDP50402 254 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 ST13P50502 369 aaKnown RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 EBPQ15125 230 aaKnown RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 CRB2Q5IJ48 1285 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 PAGE3Q5JUK9 113 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 LRIF1Q5T3J3 769 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 AGAP7PQ5VUJ5 663 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 TCTN3Q6NUS6 607 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 SLC5A8Q8N695 610 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 EXD3Q8N9H8 876 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 OR4A15Q8NGL6 344 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 OR8K3Q8NH51 312 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 C16orf52Q8NHV5 167 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 PSMA8Q8TAA3 256 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 ABHD17AQ96GS6 310 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 AGAP4Q96P64 663 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 GAL3ST4Q96RP7 486 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 SH3GL1Q99961 368 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 INPP5KQ9BT40 448 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 ITPAQ9BY32 194 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 WWTR1Q9GZV5 400 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 MMADHCQ9H3L0 296 aaPredicted RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 CDCP1Q9H5V8 836 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 ZBTB20Q9HC78 741 aaPredicted RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 DDX18Q9NVP1 670 aaKnown RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 TAS2R9Q9NYW1 312 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 MAP10Q9P2G4 905 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 VPS4AQ9UN37 437 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 C19orf53Q9UNZ5 99 aaPredicted RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 AP3M1Q9Y2T2 418 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 PCDHGA9Q9Y5G4 932 aaKnown RBP12.08□□□□□ -0.48
VPS33A-202ENST00000451053 SNX8Q9Y5X2 465 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 USP24Q9UPU5 2620 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 DOCK10Q96BY6 2186 aa12.08□□□□□ -0.48
VPS33A-202ENST00000451053 CFAP73A6NFT4 308 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 MKRN2OSH3BPM6 223 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 WWP2O00308 870 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 EMC8O43402 210 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 BCAS2O75934 225 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 DNAJC8O75937 253 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 PSMG1O95456 288 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 IFI6P09912 130 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 ZCCHC18P0CG32 403 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 PPIBP23284 216 aaKnown RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 SOAT1P35610 550 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 CPOXP36551 454 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 CDKN2CP42773 168 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 MLF1P58340 268 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 PSME3P61289 254 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 SLC25A3Q00325 362 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 KCNAB2Q13303 367 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 SPATS1Q496A3 300 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 ACER2Q5QJU3 275 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 PCSK4Q6UW60 755 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 ISLR2Q6UXK2 745 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 BNC2Q6ZN30 1099 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 LINC00696Q6ZRV3 163 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 ASRGL1Q7L266 308 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 SLC29A4Q7RTT9 530 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms