RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TFAP2CQ92754 450 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 NRBF2Q96F24 287 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 OR1F2PQ96R84 312 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 SMOC1Q9H4F8 434 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 VNN3Q9NY84 501 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.28
USP39-207ENST00000450066 DHCR7Q9UBM7 475 aaKnown RBP13.33□□□□□ -0.28
USP39-207ENST00000450066 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 NDOR1Q9UHB4 597 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 SH3GLB1Q9Y371 365 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 CLDN16Q9Y5I7 305 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 MAGED1Q9Y5V3 778 aaPredicted RBP13.33□□□□□ -0.28
USP39-207ENST00000450066 MAU2Q9Y6X3 613 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 U3KQV3 271 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 PRAMEF25A6NGN4 478 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 H6PDO95479 791 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 FESP07332 822 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 CT62P0C5K7 136 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 TNFRSF1BP20333 461 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 OR1E2P47887 323 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 KCNJ5P48544 419 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 ARHGDIAP52565 204 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 BTG2P78543 158 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 PPP2R2BQ00005 443 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 KCNC4Q03721 635 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 BIKQ13323 160 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 DSG2Q14126 1118 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 PDK3Q15120 406 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 EXOSC6Q5RKV6 272 aaKnown RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 ZC3H14Q6PJT7 736 aaKnown RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 C16orf62Q7Z3J2 963 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 GALNT12Q8IXK2 581 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 VWA5B2Q8N398 1253 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 GPR32P1Q8NGA4 272 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 APOBEC4Q8WW27 367 aaKnown RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 PROX1Q92786 737 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 GATA6Q92908 595 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 RIT1Q92963 219 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 ZNF300Q96RE9 604 aaPredicted RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 RBM4BQ9BQ04 359 aaKnown RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 RBM4Q9BWF3 364 aaKnown RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 OSBPL10Q9BXB5 764 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 REEP1Q9H902 201 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 ADAP2Q9NPF8 381 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 USE1Q9NZ43 259 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 ADAMTS20P59510 1910 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 A0A1B0GX78 115 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 NME6O75414 186 aaPredicted RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 FPR1P21462 350 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 STT3AP46977 705 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 OR1D4P47884 311 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 MERTKQ12866 999 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 PPP1R8Q12972 351 aaKnown RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 PUM1Q14671 1186 aaKnown RBP eCLIP13.32□□□□□ -0.28
USP39-207ENST00000450066 PRAMEF17Q5VTA0 474 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 DGAT2L6Q6ZPD8 337 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 WDR53Q7Z5U6 358 aaPredicted RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 HS3ST5Q8IZT8 346 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 SLC9A6Q92581 669 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 RDH12Q96NR8 316 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 EPYCQ99645 322 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 RSPO3Q9BXY4 272 aaPredicted RBP13.32□□□□□ -0.28
USP39-207ENST00000450066 PIGUQ9H490 435 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 ZNF304Q9HCX3 659 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 LANCL2Q9NS86 450 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 SRPK3Q9UPE1 567 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 PCDHGB3Q9Y5G1 929 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 PCDHGB2Q9Y5G2 931 aa13.32□□□□□ -0.28
USP39-207ENST00000450066 DSPPQ9NZW4 1301 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 ADAMDEC1O15204 470 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 RECKO95980 971 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 IFNW1P05000 195 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 ACP2P11117 423 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 MAOAP21397 527 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 S1PR1P21453 382 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 GALNSP34059 522 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 GRK6P43250 576 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 SERTAD2Q14140 314 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 DUSP5Q16690 384 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 CYP27C1Q4G0S4 372 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 TCEAL6Q6IPX3 200 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 DBX2Q6ZNG2 339 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 CHERPQ8IWX8 916 aaKnown RBP13.31□□□□□ -0.28
USP39-207ENST00000450066 RCBTB1Q8NDN9 531 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 DOK4Q8TEW6 326 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 CDS1Q92903 461 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 TCEAL3Q969E4 200 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 ZNF354BQ96LW1 612 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 CCDC74BQ96LY2 380 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 CNBD2Q96M20 576 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 ZNF578Q96N58 590 aaPredicted RBP13.31□□□□□ -0.28
USP39-207ENST00000450066 DGAT2Q96PD7 388 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 STACQ99469 402 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 PELOQ9BRX2 385 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms