RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 GJD3Q8N144 294 aa15.12■□□□□ 0.01
AP000253.1-201ENST00000449339 THAP11Q96EK4 314 aa15.12■□□□□ 0.01
AP000253.1-201ENST00000449339 SMIM10Q96HG1 83 aa15.12■□□□□ 0.01
AP000253.1-201ENST00000449339 CSF3RQ99062 836 aa15.12■□□□□ 0.01
AP000253.1-201ENST00000449339 SPATA5L1Q9BVQ7 753 aa15.12■□□□□ 0.01
AP000253.1-201ENST00000449339 ROGDIQ9GZN7 287 aa15.12■□□□□ 0.01
AP000253.1-201ENST00000449339 IL21RQ9HBE5 538 aa15.12■□□□□ 0.01
AP000253.1-201ENST00000449339 TP53BP1Q12888 1972 aaPredicted RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 URADA6NGE7 173 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 K7ESF4 209 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 MRPS14O60783 128 aaKnown RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 NME6O75414 186 aaPredicted RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 FADS2O95864 444 aaKnown RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 SPTBP11277 2137 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 ZNF182P17025 639 aaPredicted RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 ELAVL4P26378 380 aaKnown RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 MASP1P48740 699 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 VSX2P58304 361 aaPredicted RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 TNFRSF17Q02223 184 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 ARMC6Q6NXE6 501 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 KLHL17Q6TDP4 642 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 CCDC81Q6ZN84 652 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 COMTD1Q86VU5 262 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 CCDC103Q8IW40 242 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 DEPDC4Q8N2C3 294 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 CAMKVQ8NCB2 501 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 NUP43Q8NFH3 380 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 C1orf216Q8TAB5 229 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 GAB3Q8WWW8 586 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 RERGQ96A58 199 aaPredicted RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 DHRS1Q96LJ7 313 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 C10orf90Q96M02 699 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 SERINC2Q96SA4 455 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 C3orf14Q9HBI5 128 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 EQTNQ9NQ60 294 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 KCMF1Q9P0J7 381 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 ACAD8Q9UKU7 415 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 KLK4Q9Y5K2 254 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 KCNE3Q9Y6H6 103 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 H1F0P07305 194 aaKnown RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 CPN2P22792 545 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 STT3AP46977 705 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 PTGES3Q15185 160 aaKnown RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 SEC23BQ15437 767 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 LTB4RQ15722 352 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 GPAT3Q53EU6 434 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 DCST1Q5T197 706 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 SLC16A12Q6ZSM3 486 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 RNF44Q7L0R7 432 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 OR4N5Q8IXE1 308 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 SVOPQ8N4V2 548 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 CAMKK1Q8N5S9 505 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 KAT2AQ92830 837 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 BTBD2Q9BX70 525 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 UCKL1Q9NWZ5 548 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 PHF11Q9UIL8 331 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 POMT2Q9UKY4 750 aa15.11■□□□□ 0.01
AP000253.1-201ENST00000449339 THADAQ6YHU6 1953 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 PCDH15Q96QU1 1955 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 M0R3H8 397 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 UBXN7O94888 489 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 CXCL12P48061 93 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 NXPH1P58417 271 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 SIM1P81133 766 aaPredicted RBP15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 MVKQ03426 396 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 TSSK4Q6SA08 328 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 HMGN2P46Q86SG4 172 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 GKN2Q86XP6 184 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 OR7D2Q96RA2 312 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 SIGLEC11Q96RL6 698 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 AMBNQ9NP70 447 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 ACOT13Q9NPJ3 140 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 IMPAD1Q9NX62 359 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 ZNF226Q9NYT6 803 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 ENPP5Q9UJA9 477 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 SIT1Q9Y3P8 196 aa15.1■□□□□ 0.01
AP000253.1-201ENST00000449339 A0A0G2JPF8 293 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 HNRNPCL2B2RXH8 293 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 HNRNPCL3B7ZW38 293 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 B3GALT2O43825 422 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 ADAP00813 363 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 HNRNPCL4P0DMR1 293 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 ALOX12P18054 663 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 GABRB1P18505 474 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 CDH3P22223 829 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 CHMP24386 653 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 ACVR2AP27037 513 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 CTSKP43235 329 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 MAN2A2P49641 1150 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 PIN1Q13526 163 aaPredicted RBP15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 SYT6Q5T7P8 510 aaPredicted RBP15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 MLIPQ5VWP3 458 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 ABHD13Q7L211 337 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 IQCHQ86VS3 1027 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 ANKRD13BQ86YJ7 626 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 LRRC25Q8N386 305 aaPredicted RBP15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 CSNK1A1LQ8N752 337 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 OR5T3Q8NGG3 340 aa15.09■□□□□ 0.01
AP000253.1-201ENST00000449339 SLC7A13Q8TCU3 470 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms