RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KLRC4-KLRK1H3BQV0 150 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 AKAP10O43572 662 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 ZNF354AO60765 605 aaPredicted RBP13.44□□□□□ -0.26
USP39-206ENST00000448971 SNUPNO95149 360 aaKnown RBP13.44□□□□□ -0.26
USP39-206ENST00000448971 LRATO95237 230 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 PCSK2P16519 638 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 GPX3P22352 226 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 MPIP34949 423 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 TMED10P49755 219 aaKnown RBP13.44□□□□□ -0.26
USP39-206ENST00000448971 NRG3P56975 720 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 MAP4K2Q12851 820 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 ZNF628Q5EBL2 1059 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 PIGGQ5H8A4 983 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 AGBL2Q5U5Z8 902 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 ZNF615Q8N8J6 731 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 FAM13CQ8NE31 585 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 C16orf52Q8NHV5 167 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 ZNF675Q8TD23 568 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 KAT2AQ92830 837 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 PPCDCQ96CD2 204 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 SPACA9Q96E40 222 aaPredicted RBP13.44□□□□□ -0.26
USP39-206ENST00000448971 EGLN2Q96KS0 407 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 FCRL1Q96LA6 429 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 PPP1R36Q96LQ0 422 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
USP39-206ENST00000448971 ZNF395Q9H8N7 513 aaPredicted RBP13.44□□□□□ -0.26
USP39-206ENST00000448971 PRODH2Q9UF12 536 aa13.44□□□□□ -0.26
USP39-206ENST00000448971 G3V3Y1 287 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 TFECO14948 347 aaPredicted RBP13.43□□□□□ -0.26
USP39-206ENST00000448971 PDPK1O15530 556 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 PEX1O43933 1283 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 UNC5CO95185 931 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 NADKO95544 446 aaPredicted RBP13.43□□□□□ -0.26
USP39-206ENST00000448971 CBX7O95931 251 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 P04436 131 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 JUNP05412 331 aaKnown RBP13.43□□□□□ -0.26
USP39-206ENST00000448971 HPCAL1P37235 193 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 RFC3P40938 356 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 ASMTP46597 345 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 WDR4P57081 412 aaKnown RBP13.43□□□□□ -0.26
USP39-206ENST00000448971 BST1Q10588 318 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 CEBPEQ15744 281 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 TRMT12Q53H54 448 aaKnown RBP13.43□□□□□ -0.26
USP39-206ENST00000448971 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 ANKRD26P1Q6NSI1 321 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 GFRALQ6UXV0 394 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 FAM47EQ6ZV65 393 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 HDXQ7Z353 690 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 SULF2Q8IWU5 870 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 DND1Q8IYX4 353 aaKnown RBP13.43□□□□□ -0.26
USP39-206ENST00000448971 LIX1Q8N485 282 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 SLC15A4Q8N697 577 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 GOLM1Q8NBJ4 401 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 POGLUT1Q8NBL1 392 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.43□□□□□ -0.26
USP39-206ENST00000448971 SGCZQ96LD1 299 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 C3orf30Q96M34 536 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 C20orf27Q9GZN8 174 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 SACM1LQ9NTJ5 587 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 SEC14L3Q9UDX4 400 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 DTX4Q9Y2E6 619 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 CACNA1CQ13936 2221 aa13.43□□□□□ -0.26
USP39-206ENST00000448971 GTF3C1Q12789 2109 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 CAPN14A8MX76 684 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 NPIPA5E9PKD4 350 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ACOT7O00154 380 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 BCAS2O75934 225 aaPredicted RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 CCL3P10147 92 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 BCKDHAP12694 445 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 DDX5P17844 614 aaKnown RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 MST1P26927 711 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 PTGER4P35408 488 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 MC3RP41968 323 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 RPL14P50914 215 aaKnown RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 SLC18A1P54219 525 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 PLGLB1Q02325 96 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 PLCXD2Q0VAA5 305 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 MGAT2Q10469 447 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ZNF155Q12901 538 aaPredicted RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 HSPB3Q12988 150 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 DUSP8Q13202 625 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 RPS6KA2Q15349 733 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ZNF630Q2M218 657 aaPredicted RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 TMEM107Q6UX40 140 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 GK5Q6ZS86 529 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 TRIM42Q8IWZ5 723 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 PRR22Q8IZ63 422 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 SIMC1Q8NDZ2 872 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 OR5M3Q8NGP4 307 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ZFP28Q8NHY6 868 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 TP53INP1Q96A56 240 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ARL8AQ96BM9 186 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 CTHRC1Q96CG8 243 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 CCDC120Q96HB5 630 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ATP6V1G3Q96LB4 118 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 LURAP1Q96LR2 239 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms