RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IFT81Q8WYA0 676 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 HGDQ93099 445 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 OMA1Q96E52 524 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 HSPBAP1Q96EW2 488 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 WDYHV1Q96HA8 205 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 CLEC4MQ9H2X3 399 aaPredicted RBP25.82■■□□□ 1.72
CBX4-202ENST00000448310 EPB41L4BQ9H329 900 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 ZNF639Q9UID6 485 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 ZNF225Q9UK10 706 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 NF1P21359 2839 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 URI1O94763 535 aaPredicted RBP25.81■■□□□ 1.72
CBX4-202ENST00000448310 OR4F21O95013 312 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 CBX7O95931 251 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 ATP1B1P05026 303 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 CSNK2A2P19784 350 aaPredicted RBP25.81■■□□□ 1.72
CBX4-202ENST00000448310 ALDH9A1P49189 494 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 NHSL2Q5HYW2 709 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 C1orf52Q8N6N3 182 aaKnown RBP25.81■■□□□ 1.72
CBX4-202ENST00000448310 FAM83FQ8NEG4 500 aaPredicted RBP25.81■■□□□ 1.72
CBX4-202ENST00000448310 ABTB1Q969K4 478 aaPredicted RBP25.81■■□□□ 1.72
CBX4-202ENST00000448310 FMO2Q99518 471 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 GALNT9Q9HCQ5 603 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 RASSF1Q9NS23 344 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 SNX6Q9UNH7 406 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 CFL2Q9Y281 166 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 PLLPQ9Y342 182 aa25.81■■□□□ 1.72
CBX4-202ENST00000448310 ABCA4P78363 2273 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 CNTFP26441 200 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 PTGDSP41222 190 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 NAGLUP54802 743 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 MRPS35P82673 323 aaKnown RBP25.8■■□□□ 1.72
CBX4-202ENST00000448310 PLCXD2Q0VAA5 305 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 FLYWCH1Q4VC44 716 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 TRMT12Q53H54 448 aaKnown RBP25.8■■□□□ 1.72
CBX4-202ENST00000448310 TMEM151AQ8N4L1 468 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 NOA1Q8NC60 698 aaKnown RBP25.8■■□□□ 1.72
CBX4-202ENST00000448310 OR52R1Q8NGF1 315 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 CNRIP1Q96F85 164 aaPredicted RBP25.8■■□□□ 1.72
CBX4-202ENST00000448310 LCORQ96JN0 433 aaPredicted RBP25.8■■□□□ 1.72
CBX4-202ENST00000448310 OSBPL11Q9BXB4 747 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 BRF2Q9HAW0 419 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 ZNF629Q9UEG4 869 aaPredicted RBP25.8■■□□□ 1.72
CBX4-202ENST00000448310 MAPRE3Q9UPY8 281 aa25.8■■□□□ 1.72
CBX4-202ENST00000448310 DIAPH2O60879 1101 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 ICOSLGO75144 302 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 PCSK2P16519 638 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 NAGAP17050 411 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 FBXL19-AS1Q494R0 122 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 TEX35Q5T0J7 233 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 NUP54Q7Z3B4 507 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 LRRC46Q96FV0 321 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 C16orf45Q96MC5 204 aaPredicted RBP25.79■■□□□ 1.72
CBX4-202ENST00000448310 KLRF1Q9NZS2 232 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 TRPS1Q9UHF7 1281 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 ST6GALNAC2Q9UJ37 374 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 ZNF180Q9UJW8 692 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 CBLCQ9ULV8 474 aa25.79■■□□□ 1.72
CBX4-202ENST00000448310 ZNF469Q96JG9 3925 aaPredicted RBP25.79■■□□□ 1.72
CBX4-202ENST00000448310 FAM221AA4D161 298 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 CD8B2A6NJW9 211 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 A6NNC1 897 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 SNPHO15079 494 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 UGT2B11O75310 529 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 TACR1P25103 407 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 ECHS1P30084 290 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 PEX19P40855 299 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 SF3B4Q15427 424 aaKnown RBP eCLIP25.78■■□□□ 1.725e-8■■■■□ 23.9
CBX4-202ENST00000448310 MMGT1Q8N4V1 131 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 CDYL2Q8N8U2 506 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 NINJ1Q92982 152 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 CTHRC1Q96CG8 243 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 ZNF681Q96N22 645 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 FAIM2Q9BWQ8 316 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 C1QTNF3Q9BXJ4 246 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 SERHLQ9NQF3 203 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 HEY2Q9UBP5 337 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 PSME2Q9UL46 239 aa25.78■■□□□ 1.72
CBX4-202ENST00000448310 MBD3L4A6NDZ8 208 aaPredicted RBP25.77■■□□□ 1.72
CBX4-202ENST00000448310 MBD3L3A6NE82 208 aaPredicted RBP25.77■■□□□ 1.72
CBX4-202ENST00000448310 MBD3L5A6NJ08 208 aaPredicted RBP25.77■■□□□ 1.72
CBX4-202ENST00000448310 CDH16O75309 829 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 NME6O75414 186 aaPredicted RBP25.77■■□□□ 1.72
CBX4-202ENST00000448310 ESRRBO95718 433 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 CHN1P15882 459 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 HSD17B3P37058 310 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 EMDP50402 254 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 CLCQ05315 142 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 CEBPEQ15744 281 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 WHAMMP3Q1A5X7 153 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 SLC30A6Q6NXT4 461 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 CDC20BQ86Y33 519 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 C9orf106Q8NAJ2 232 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 MBD3L2Q8NHZ7 208 aaPredicted RBP25.77■■□□□ 1.72
CBX4-202ENST00000448310 RDH11Q8TC12 318 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 FAM222BQ8WU58 562 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 RMND5BQ96G75 393 aaPredicted RBP25.77■■□□□ 1.72
CBX4-202ENST00000448310 FOXC2Q99958 501 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 TSPYL1Q9H0U9 437 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 ANKRA2Q9H9E1 313 aa25.77■■□□□ 1.72
CBX4-202ENST00000448310 PFDN4Q9NQP4 134 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms