RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CHST7Q9NS84 486 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 STC2O76061 302 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 GCGP01275 180 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 AKAIN1P0CW23 69 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 PGCP20142 388 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 STT3AP46977 705 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CES4AQ5XG92 561 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 OR6F1Q8NGZ6 308 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 IGDCC4Q8TDY8 1250 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM18Q96B42 140 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ARV1Q9H2C2 271 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TIMM22Q9Y584 194 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 RNH1P13489 461 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 RXRBP28702 533 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 HOXD12P35452 270 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 PMS2P3Q13401 168 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF718Q3SXZ3 478 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 AMZ1Q400G9 498 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 KHDC1Q4VXA5 237 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CLEC6AQ6EIG7 209 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 OR2M3Q8NG83 312 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CNN2Q99439 309 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 FDXACB1Q9BRP7 624 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 QRSL1Q9H0R6 528 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ZFR2Q9UPR6 939 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 DOCK11Q5JSL3 2073 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 USP6P35125 1406 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 KLHL33A6NCF5 533 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 C1RP00736 705 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CHRNA1P02708 482 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 HNF1AP20823 631 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CDK6Q00534 326 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 DUOXA1Q1HG43 343 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SEZ6Q53EL9 994 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 TMPRSS9Q7Z410 1059 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 OR4N2Q8NGD1 307 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CPNE4Q96A23 557 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CCNL2Q96S94 520 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 MTERF1Q99551 399 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 RPF2Q9H7B2 306 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 EXOGQ9Y2C4 368 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SCN2AQ99250 2005 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 TGM4P49221 684 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 OR10K2Q6IF99 312 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 TXNRD3Q86VQ6 643 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 OR5L1Q8NGL2 311 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SYNJ1O43426 1573 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 GAPDHSO14556 408 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ORM1P02763 201 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 EPHA1P21709 976 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 PCGF3Q3KNV8 242 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF704Q6ZNC4 412 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SOCS4Q8WXH5 440 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 TMBIM1Q969X1 311 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 IMP4Q96G21 291 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 GPR21Q99679 349 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SNRNP25Q9BV90 132 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ADAMTS10Q9H324 1103 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 UTS2RQ9UKP6 389 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 F8VP50 259 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CH25HO95992 272 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 OR10J4P0C629 311 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 PABPC4LP0CB38 370 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 IGFBP4P22692 258 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 GIPRP48546 466 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 GPR176Q14439 515 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 RNF212Q495C1 297 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ACTBL2Q562R1 376 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 VASNQ6EMK4 673 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 STEAP1BQ6NZ63 245 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 VWA1Q6PCB0 445 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 NIPA2Q8N8Q9 360 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 TRMT2BQ96GJ1 504 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ZBTB20Q9HC78 741 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 MAST1Q9Y2H9 1570 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SPTA1P02549 2419 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 GOT1P17174 413 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ENGP17813 658 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ABHD18Q0P651 414 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 GRB10Q13322 594 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SGCAQ16586 387 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ARHGAP40Q5TG30 622 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 PNCKQ6P2M8 343 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 LEG1Q6P5S2 330 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 IL34Q6ZMJ4 242 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ELP4Q96EB1 424 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 TECTBQ96PL2 329 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 PBX4Q9BYU1 374 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SIAEQ9HAT2 523 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 FBXL4Q9UKA2 621 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 PCDHA9Q9Y5H5 950 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 BCHEP06276 602 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 ANXA7P20073 488 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 SOX2P48431 317 aa8.56□□□□□ -1.04
NIPBL-202ENST00000448238 CRYZQ08257 329 aaKnown RBP8.56□□□□□ -1.04
NIPBL-202ENST00000448238 TSEN2Q8NCE0 465 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms