RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 MED8Q96G25 268 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TMEM176AQ96HP8 235 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ZNF471Q9BX82 626 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 DPEP2Q9H4A9 486 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 KIR3DX1Q9H7L2 352 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 BRF2Q9HAW0 419 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MIEF1Q9NQG6 463 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TMLHEQ9NVH6 421 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 KLHL28Q9NXS3 571 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 KLHL9Q9P2J3 617 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 FKBPLQ9UIM3 349 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 USF3Q68DE3 2245 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 RGPD1P0DJD0 1748 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 KDM4FA0A1W2PPD8 638 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 KDM4EB2RXH2 506 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 CYB561D2O14569 222 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CSF1P09603 554 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CORO1AP31146 461 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 PDIA6Q15084 440 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 COX19Q49B96 90 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 PSMG4Q5JS54 123 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TMCO2Q7Z6W1 182 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 GPR149Q86SP6 731 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 FAM185AQ8N0U4 392 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 BEST3Q8N1M1 668 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 UBAC2Q8NBM4 344 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 OR4Q3Q8NH05 313 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CYP2W1Q8TAV3 490 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CREB3L4Q8TEY5 395 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MYLIPQ8WY64 445 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 SLAMF9Q96A28 289 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 PIWIL1Q96J94 861 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 PKMYT1Q99640 499 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MAP3K3Q99759 626 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 LRFN3Q9BTN0 628 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ZNF426Q9BUY5 554 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 DERL2Q9GZP9 239 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 RIOX1Q9H6W3 641 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 EVA1AQ9H8M9 152 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ERVK13-1Q9NX77 482 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TAS2R5Q9NYW4 299 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 LUZP4Q9P127 313 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ANGPT4Q9Y264 503 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 PCDHA9Q9Y5H5 950 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MTCH2Q9Y6C9 303 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CEP250Q9BV73 2442 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 HYKKA2RU49 373 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ZBTB7AO95365 584 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ZNF250P15622 560 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 EPHA1P21709 976 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ACTC1P68032 377 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ACTA1P68133 377 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 SIM1P81133 766 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 BEX3Q00994 111 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 PNRC1Q12796 327 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 PPIGQ13427 754 aaKnown RBP eCLIP2.78□□□□□ -1.96
CHD9-203ENST00000447540 SERINC3Q13530 473 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MEP1AQ16819 746 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 PLAC9Q5JTB6 97 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 DRAM2Q6UX65 266 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 QSOX2Q6ZRP7 698 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ZBTB46Q86UZ6 589 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 GMCL1P1Q8NEA9 526 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 SPPL2BQ8TCT7 592 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 GEMIN6Q8WXD5 167 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 HAS1Q92839 578 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CXorf40BQ96DE9 158 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 S100A16Q96FQ6 103 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 C16orf58Q96GQ5 468 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 IL12RB2Q99665 862 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 OPN3Q9H1Y3 402 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 ZFYVE1Q9HBF4 777 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 FAM212BQ9NTI7 297 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 CAMK2AQ9UQM7 478 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TBX22Q9Y458 520 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 DIP2CQ9Y2E4 1556 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MON2Q7Z3U7 1717 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 LINC00587B1AMM8 73 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 G3V3Q6 166 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 NMBP08949 121 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MMP10P09238 476 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ACPPP15309 386 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CPEP16870 476 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ENGP17813 658 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 GGT1P19440 569 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 PTPN3P26045 913 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CDX1P47902 265 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 SNRPD2P62316 118 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 RAP1AP62834 184 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ITKQ08881 620 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 ILKQ13418 452 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 CAMK2DQ13557 499 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 BMPR2Q13873 1038 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 BCL2L15Q5TBC7 163 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 SLC29A4Q7RTT9 530 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TRMT1LQ7Z2T5 733 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 ZFAND4Q86XD8 727 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 OR14A16Q8NHC5 309 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 SNX33Q8WV41 574 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TMEM159Q96B96 161 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms