RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 TACR1P25103 407 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 GPC1P35052 558 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 KRT20P35900 424 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 TDGF1P3P51864 188 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 KCNJ2P63252 427 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 RPS6KA2Q15349 733 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 CEBPEQ15744 281 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 TRMT12Q53H54 448 aaKnown RBP15.11■□□□□ 0.01
SF3A1-204ENST00000447376 ZNF628Q5EBL2 1059 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 BNC2Q6ZN30 1099 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-204ENST00000447376 SLC22A16Q86VW1 577 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 GHDCQ8N2G8 530 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 KAT2AQ92830 837 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 GFM2Q969S9 779 aaKnown RBP15.11■□□□□ 0.01
SF3A1-204ENST00000447376 CTHRC1Q96CG8 243 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 ZBED6CLQ96FA7 236 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-204ENST00000447376 ZNF764Q96H86 408 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-204ENST00000447376 LCORQ96JN0 433 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-204ENST00000447376 GPR137Q96N19 417 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 ATAD3AQ9NVI7 634 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 DDX18Q9NVP1 670 aaKnown RBP15.11■□□□□ 0.01
SF3A1-204ENST00000447376 ASIC5Q9NY37 505 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 SH3BP4Q9P0V3 963 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 GIMAP2Q9UG22 337 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 BAIAP2L1Q9UHR4 511 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 ZNF639Q9UID6 485 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 SLC5A6Q9Y289 635 aa15.11■□□□□ 0.01
SF3A1-204ENST00000447376 A0A1B0GUH1 482 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 AKAP10O43572 662 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 PLOD3O60568 738 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 LRATO95237 230 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 PRPS1L1P21108 318 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 S1PR1P21453 382 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 MST1P26927 711 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 PTGER1P34995 402 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 PLCXD2Q0VAA5 305 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 ZNHIT3Q15649 155 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-204ENST00000447376 ZNF791Q3KP31 576 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-204ENST00000447376 TBCELQ5QJ74 424 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 NXNQ6DKJ4 435 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 ACAD11Q709F0 780 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 LARP4Q71RC2 724 aaKnown RBP eCLIP15.1■□□□□ 0.01
SF3A1-204ENST00000447376 SPATA19Q7Z5L4 167 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 ZNF441Q8N8Z8 693 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 ZFP62Q8NB50 900 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-204ENST00000447376 OR2M7Q8NG81 312 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 OR5M3Q8NGP4 307 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 CLHC1Q8NHS4 586 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 EGLN2Q96KS0 407 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 ITPAQ9BY32 194 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 TSPAN10Q9H1Z9 355 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-204ENST00000447376 SLCO1B3Q9NPD5 702 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 BOKQ9UMX3 212 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-204ENST00000447376 USH1CQ9Y6N9 552 aa15.1■□□□□ 0.01
SF3A1-204ENST00000447376 SDHDO14521 159 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 ASNA1O43681 348 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 CDC40O60508 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
SF3A1-204ENST00000447376 TBX19O60806 448 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 DIAPH2O60879 1101 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 NADKO95544 446 aaPredicted RBP15.09■□□□□ 0.01
SF3A1-204ENST00000447376 CBX7O95931 251 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 CCL3P10147 92 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 ABOP16442 354 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 NAGAP17050 411 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 RFC3P40938 356 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 PPICP45877 212 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 MANFP55145 182 aaKnown RBP15.09■□□□□ 0.01
SF3A1-204ENST00000447376 KCNK10P57789 538 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 DUSP2Q05923 314 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 MGAT2Q10469 447 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 ZNF155Q12901 538 aaPredicted RBP15.09■□□□□ 0.01
SF3A1-204ENST00000447376 NTRK2Q16620 822 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 OGFOD2Q6N063 350 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 EID3Q8N140 333 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 FBXW8Q8N3Y1 598 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 NATD1Q8N6N6 113 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 CEP70Q8NHQ1 597 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 ACTRT2Q8TDY3 377 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 PAQR8Q8TEZ7 354 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 SSC4DQ8WTU2 575 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 DIO2Q92813 273 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 ADIPOR1Q96A54 375 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 SECISBP2Q96T21 854 aaKnown RBP15.09■□□□□ 0.01
SF3A1-204ENST00000447376 SUCOQ9UBS9 1254 aaKnown RBP15.09■□□□□ 0.01
SF3A1-204ENST00000447376 B4GALT7Q9UBV7 327 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 CROCCQ5TZA2 2017 aa15.09■□□□□ 0.01
SF3A1-204ENST00000447376 ESPL1Q14674 2120 aa15.08■□□□□ 0.01
SF3A1-204ENST00000447376 A0A087WV62 115 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 TRGV8A0A0C4DH27 118 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 FRG2CA6NGY1 282 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 G3V3Y1 287 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 SCAMP2O15127 329 aaKnown RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 ZNF354AO60765 605 aaPredicted RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 ERN1O75460 977 aaKnown RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 ZIC2O95409 532 aaPredicted RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 G6PDP11413 515 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 DRD5P21918 477 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 EPHA3P29320 983 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 EMDP50402 254 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 CLDN8P56748 225 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms