RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 MAPKAP1Q9BPZ7 522 aa6.41□□□□□ -1.38
LRRC28-203ENST00000447360 TMEM204Q9BSN7 226 aa6.41□□□□□ -1.38
LRRC28-203ENST00000447360 SLCO5A1Q9H2Y9 848 aa6.41□□□□□ -1.38
LRRC28-203ENST00000447360 PPANQ9NQ55 473 aaKnown RBP6.41□□□□□ -1.38
LRRC28-203ENST00000447360 SNX15Q9NRS6 342 aa6.41□□□□□ -1.38
LRRC28-203ENST00000447360 TEX10Q9NXF1 929 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-203ENST00000447360 GRHL1Q9NZI5 618 aa6.41□□□□□ -1.38
LRRC28-203ENST00000447360 IKZF3Q9UKT9 509 aa6.41□□□□□ -1.38
LRRC28-203ENST00000447360 RNF112Q9ULX5 631 aa6.41□□□□□ -1.38
LRRC28-203ENST00000447360 RAI1Q7Z5J4 1906 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 C2orf92A0A1B0GVN3 265 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 CXorf49A8MYA2 514 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 GNB5O14775 395 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 EMC8O43402 210 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 FGF17O60258 216 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 CBR3O75828 277 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 SCELO95171 688 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 CGAP01215 116 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 THBDP07204 575 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 RHOXF2BP0C7M4 288 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 TBXA2RP21731 343 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 SSTR1P30872 391 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ACVR1BP36896 505 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 KIR2DL2P43627 348 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 LHX2P50458 406 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 NRG3P56975 720 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 TAS2R39P59534 338 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 HERVK_113P63132 956 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ERVK-8P63133 956 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 C2orf54Q08AI8 447 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 MGAT5Q09328 741 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 SNTA1Q13424 505 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 SLBPQ14493 270 aaKnown RBP eCLIP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 SETDB1Q15047 1291 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 BCL2A1Q16548 175 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 PPP1R3AQ16821 1122 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 VWA1Q6PCB0 445 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 AAGABQ6PD74 315 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 SBSNQ6UWP8 590 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 PLXDC2Q6UX71 529 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 DGAT2L6Q6ZPD8 337 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 CYS1Q717R9 158 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ZNF572Q7Z3I7 529 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 P4HA3Q7Z4N8 544 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 VN1R5Q7Z5H4 357 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 JAZF1Q86VZ6 243 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 IFNEQ86WN2 208 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ZBED8Q8IZ13 594 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ACOT4Q8N9L9 421 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 OR14L1PQ8NHC6 308 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 AKAP1Q92667 903 aaKnown RBP eCLIP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 TANKQ92844 425 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 GTPBP3Q969Y2 492 aaKnown RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 VPS39Q96JC1 886 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 PELOQ9BRX2 385 aaKnown RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 TBCDQ9BTW9 1192 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ERVK-6Q9BXR3 956 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 CAPS2Q9BXY5 557 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 PLA2G12AQ9BZM1 189 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 OR2B2Q9GZK3 357 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 SHARPINQ9H0F6 387 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 OPN3Q9H1Y3 402 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 DPH5Q9H2P9 285 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 EHD1Q9H4M9 534 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ACTR8Q9H981 624 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 BARX1Q9HBU1 254 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 MS4A12Q9NXJ0 267 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 WHRNQ9P202 907 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 EXO1Q9UQ84 846 aaKnown RBP6.4□□□□□ -1.38
LRRC28-203ENST00000447360 ERVK-19Q9WJR5 959 aa6.4□□□□□ -1.38
LRRC28-203ENST00000447360 NCKAP5O14513 1909 aa6.4□□□□□ -1.39
LRRC28-203ENST00000447360 NINQ8N4C6 2090 aa6.4□□□□□ -1.39
LRRC28-203ENST00000447360 SLC22A20A6NK97 555 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 GPRIN2O60269 458 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 ADAM11O75078 769 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 TNFRSF21O75509 655 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 PLAUP00749 431 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 PGRP06401 933 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 SOD3P08294 240 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 DANCRP0C864 163 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 ZNF708P17019 499 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 NAGAP17050 411 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 SRD5A1P18405 259 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 HIST1H1TP22492 207 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-203ENST00000447360 CPN2P22792 545 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 ATP5A1P25705 553 aaKnown RBP6.39□□□□□ -1.39
LRRC28-203ENST00000447360 GALNSP34059 522 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 PLTPP55058 493 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 CLDN18P56856 261 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 GPX6P59796 221 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 RPS13P62277 151 aaKnown RBP6.39□□□□□ -1.39
LRRC28-203ENST00000447360 VLDLRP98155 873 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 CDKL1Q00532 357 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 GUCY2DQ02846 1103 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 ZNF267Q14586 743 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-203ENST00000447360 TMEM249Q2WGJ8 235 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 KBTBD12Q3ZCT8 623 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 TMEM35AQ53FP2 167 aa6.39□□□□□ -1.39
LRRC28-203ENST00000447360 LIPNQ5VXI9 398 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms