RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ASCL1P50553 236 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 AP3M2P53677 418 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 AP2S1P53680 142 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 GABARAPL2P60520 117 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 DSTNP60981 165 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 COPZ1P61923 177 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SCRN3Q0VDG4 424 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 BST1Q10588 318 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 NAB1Q13506 487 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ART3Q13508 389 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SCARB2Q14108 478 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 NFE2L1Q14494 772 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SIX1Q15475 284 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 DGUOKQ16854 277 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF181Q2M3W8 571 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 TEX44Q53QW1 395 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 HECTD3Q5T447 861 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 NEK5Q6P3R8 708 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF852Q6ZMS4 543 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 DSG4Q86SJ6 1040 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 PRUNE1Q86TP1 453 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ADCK1Q86TW2 530 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC26A11Q86WA9 606 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 COMMD2Q86X83 199 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 METTL23Q86XA0 190 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 LACC1Q8IV20 430 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 NUDCD3Q8IVD9 361 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 UNC45BQ8IWX7 931 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 KATNAL2Q8IYT4 538 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ELMOD2Q8IZ81 293 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CRYBG2Q8N1P7 616 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 TCAIMQ8N3R3 496 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 POC1AQ8NBT0 407 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SETD6Q8TBK2 473 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 RNF128Q8TEB7 428 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 C1orf54Q8WWF1 131 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC35C1Q96A29 364 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SPSB1Q96BD6 273 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ASB9Q96DX5 294 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 OMA1Q96E52 524 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CEP170P1Q96L14 293 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SGK494Q96LW2 274 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF558Q96NG5 402 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 PSKH2Q96QS6 385 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ACAT2Q9BWD1 397 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 GON7Q9BXV9 100 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SNX25Q9H3E2 840 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ARMC7Q9H6L4 198 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 COPS7BQ9H9Q2 264 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 APOBEC3GQ9HC16 384 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 NEK6Q9HC98 313 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 MYNNQ9NPC7 610 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 C12orf4Q9NQ89 552 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 C20orf96Q9NUD7 363 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 DDX28Q9NUL7 540 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 KCNN3Q9UGI6 736 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ENPP5Q9UJA9 477 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ANAPC7Q9UJX3 599 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CPSF3Q9UKF6 684 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 PSME2Q9UL46 239 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 RBMX2Q9Y388 322 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SNX5Q9Y5X3 404 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 TMEM2Q9UHN6 1383 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 KCPQ6ZWJ8 1503 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 A0A1B0GUV1 79 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 LOC105371267A0A1B0GV96 52 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 A0A1W2PPW3 197 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 GOLGA8IPA6NC78 632 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 NEMP2A6NFY4 417 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRIM64BA6NI03 449 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 F5H6K3 240 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLCO1B7G3V0H7 640 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 C16orf97H3BN30 126 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 H7C0C1 242 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 J3QRK9 145 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SGK1O00141 431 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCRL2O00421 344 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ANGPT2O15123 496 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SULT1B1O43704 296 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SNNO75324 88 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TOM1L1O75674 476 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 BCAS2O75934 225 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MYO1DO94832 1006 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 NADKO95544 446 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 WDPCPO95876 746 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SERPINB2P05120 415 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SERPINE1P05121 402 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 YES1P07947 543 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 KRT7P08729 469 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRAPPC2P0DI81 140 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRAPPC2BP0DI82 140 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 PTPRFP10586 1907 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TGFB3P10600 412 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ACP2P11117 423 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCND2P30279 289 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 HOXC8P31273 242 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 NSFP46459 744 aaKnown RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 KCNJ1P48048 391 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ETV1P50549 477 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 BMXP51813 675 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms