RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 C14orf79Q96F83 325 aa19■□□□□ 0.63
SDC1-205ENST00000447124 NODALQ96S42 347 aa19■□□□□ 0.63
SDC1-205ENST00000447124 ANKRA2Q9H9E1 313 aa19■□□□□ 0.63
SDC1-205ENST00000447124 ZNF780BQ9Y6R6 833 aa19■□□□□ 0.63
SDC1-205ENST00000447124 MED12Q93074 2177 aa19■□□□□ 0.63
SDC1-205ENST00000447124 CCDC168Q8NDH2 2452 aa19■□□□□ 0.63
SDC1-205ENST00000447124 CSMD2Q7Z408 3487 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 SERTM1A2A2V5 107 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 PCDH7O60245 1069 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 NME6O75414 186 aaPredicted RBP18.99■□□□□ 0.63
SDC1-205ENST00000447124 PPM1BO75688 479 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 SNX4O95219 450 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 ENO1P06733 434 aaKnown RBP18.99■□□□□ 0.63
SDC1-205ENST00000447124 NAGAP17050 411 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 GDF1P27539 372 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 PTGDSP41222 190 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 ZNF628Q5EBL2 1059 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 ULK2Q8IYT8 1036 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 CCNYL1Q8N7R7 359 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 LCORQ96JN0 433 aaPredicted RBP18.99■□□□□ 0.63
SDC1-205ENST00000447124 ZNF597Q96LX8 424 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 C12orf65Q9H3J6 166 aaKnown RBP18.99■□□□□ 0.63
SDC1-205ENST00000447124 TNFRSF12AQ9NP84 129 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 MID1IP1Q9NPA3 183 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 CFL2Q9Y281 166 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 SPG11Q96JI7 2443 aa18.99■□□□□ 0.63
SDC1-205ENST00000447124 KDM4EB2RXH2 506 aaPredicted RBP18.98■□□□□ 0.63
SDC1-205ENST00000447124 TRAPPC6AO75865 159 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 PROCP04070 461 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 HPNP05981 417 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 DRD2P14416 443 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 DRD5P21918 477 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 MSX1P28360 303 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 SLCO1A2P46721 670 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 ZFP36L2P47974 494 aaKnown RBP18.98■□□□□ 0.63
SDC1-205ENST00000447124 CDK9P50750 372 aaKnown RBP18.98■□□□□ 0.63
SDC1-205ENST00000447124 TLE4Q04727 773 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 GALNT18Q6P9A2 607 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 ZYG11AQ6WRX3 759 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 NUP54Q7Z3B4 507 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 KAT2AQ92830 837 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 EXOSC8Q96B26 276 aaKnown RBP18.98■□□□□ 0.63
SDC1-205ENST00000447124 OMA1Q96E52 524 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 HSPBAP1Q96EW2 488 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 TIMP4Q99727 224 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 EBPLQ9BY08 206 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 SIRT5Q9NXA8 310 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 B4GALT7Q9UBV7 327 aa18.98■□□□□ 0.63
SDC1-205ENST00000447124 C2orf72A6NCS6 295 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 GNB5O14775 395 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 HOXD4P09016 255 aaPredicted RBP18.97■□□□□ 0.63
SDC1-205ENST00000447124 GABRA1P14867 456 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 TIA1P31483 386 aaKnown RBP eCLIP18.97■□□□□ 0.63
SDC1-205ENST00000447124 PPICP45877 212 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 TMED10P49755 219 aaKnown RBP18.97■□□□□ 0.63
SDC1-205ENST00000447124 NAGLUP54802 743 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 CRYZQ08257 329 aaKnown RBP18.97■□□□□ 0.63
SDC1-205ENST00000447124 ACSM2AQ08AH3 577 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 EIPR1Q53HC9 387 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 ACSM2BQ68CK6 577 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 TIGD3Q6B0B8 471 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 PACS2Q86VP3 889 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 DMRTC2Q8IXT2 367 aaPredicted RBP18.97■□□□□ 0.63
SDC1-205ENST00000447124 LIX1Q8N485 282 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 EIF1ADQ8N9N8 165 aaKnown RBP18.97■□□□□ 0.63
SDC1-205ENST00000447124 ZNF675Q8TD23 568 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 TMEM41AQ96HV5 264 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 EHD3Q9NZN3 535 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 STK38LQ9Y2H1 464 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 GPR55Q9Y2T6 319 aaPredicted RBP18.97■□□□□ 0.63
SDC1-205ENST00000447124 C15orf41Q9Y2V0 281 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 SLC6A5Q9Y345 797 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 PCDHGB3Q9Y5G1 929 aa18.97■□□□□ 0.63
SDC1-205ENST00000447124 TEP1Q99973 2627 aaKnown RBP18.97■□□□□ 0.63
SDC1-205ENST00000447124 GNG14A0A1W2PPG7 69 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 TO15178 435 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 PLIN3O60664 434 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 UGT2B11O75310 529 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 GLRA3O75311 464 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 MYL2P10916 166 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 KRT15P19012 456 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 ELAVL4P26378 380 aaKnown RBP18.96■□□□□ 0.63
SDC1-205ENST00000447124 PTPN6P29350 595 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 DLX5P56178 289 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 CEBPEQ15744 281 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 SPIN4Q56A73 249 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 RIPPLY2Q5TAB7 128 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 OR9A2Q8NGT5 310 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 SLC35C2Q9NQQ7 365 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 PRODH2Q9UF12 536 aa18.96■□□□□ 0.63
SDC1-205ENST00000447124 EXPH5Q8NEV8 1989 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 C15orf38-AP3S2A0A0A6YYH1 394 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 AHRRA9YTQ3 701 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 ACOX3O15254 700 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 ICOSLGO75144 302 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 ANXA4P09525 319 aaPredicted RBP18.95■□□□□ 0.62
SDC1-205ENST00000447124 CRHR1P34998 444 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 MASP1P48740 699 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 WNT3P56703 355 aa18.95■□□□□ 0.62
SDC1-205ENST00000447124 DNAJB13P59910 316 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms