RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 RBM23Q86U06 439 aaKnown RBP8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 LDLRAD3Q86YD5 345 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 TRIM48Q8IWZ4 208 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 PGAM4Q8N0Y7 254 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 OR2C3Q8N628 320 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 LRRC57Q8N9N7 239 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 ACOT12Q8WYK0 555 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 JAM3Q9BX67 310 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 B3GNT5Q9BYG0 378 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 TMEM117Q9H0C3 514 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 OR10A5Q9H207 317 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 MMP28Q9H239 520 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 SLC28A3Q9HAS3 691 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 ZFYVE1Q9HBF4 777 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 FZD3Q9NPG1 666 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 CREBZFQ9NS37 354 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 PLEK2Q9NYT0 353 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 SLC17A7Q9P2U7 560 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 RBPJLQ9UBG7 517 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 CD84Q9UIB8 345 aa8.21□□□□□ -1.1
MCF2L2-203ENST00000447025 DLG5Q8TDM6 1919 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 TCRBV16S1A1N1A0A5B0 115 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 MCIDASD6RGH6 385 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 NME2P1O60361 137 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 PPP3CBP16298 524 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 PSMB10P40306 273 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CSNK1EP49674 416 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 RORCP51449 518 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ITGA1P56199 1179 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 NPRL3Q12980 569 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CBFBQ13951 182 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 LARS2Q15031 903 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 EIF4HQ15056 248 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 QPRTQ15274 297 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 SURF2Q15527 256 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 DECR1Q16698 335 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 SPANXN2Q5MJ10 180 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 PADI6Q6TGC4 694 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CHST15Q7LFX5 561 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 B3GNT8Q7Z7M8 397 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 KMT5CQ86Y97 462 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 APCDD1Q8J025 514 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ZDHHC1Q8WTX9 485 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 FAM222BQ8WU58 562 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CXorf58Q96LI9 332 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 FOXN4Q96NZ1 517 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ELF4Q99607 663 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 MESP1Q9BRJ9 268 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 SNHG12Q9BXW3 62 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ACSS3Q9H6R3 686 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 MYNNQ9NPC7 610 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 EIF2B3Q9NR50 452 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ECHDC1Q9NTX5 307 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CACNA2D2Q9NY47 1150 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 GNG8Q9UK08 70 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 PADI2Q9Y2J8 665 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 FBXO7Q9Y3I1 522 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 MEGF6O75095 1541 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ABCA3Q99758 1704 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CCDC187A0A096LP49 1063 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 TMEM72A0PK05 275 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 NPIPB9F8W1W9 429 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 FABP7O15540 132 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 GABRA1P14867 456 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ZNF44P15621 663 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 HLA-GP17693 338 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 AGAP20933 346 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 SLC6A1P30531 599 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 MAS1LP35410 378 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 IFNGR2P38484 337 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CLCN3P51790 818 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CTSCP53634 463 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 GP2P55259 537 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CDH11P55287 796 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 EEFSECP57772 596 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 VSX2P58304 361 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 PPP3CAQ08209 521 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CNTN1Q12860 1018 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 PWP1Q13610 501 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 COL9A3Q14050 684 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 NR6A1Q15406 480 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ATP6V1FQ16864 119 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ISXQ2M1V0 245 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 TEX44Q53QW1 395 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 OR6B2Q6IFH4 312 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 SLC29A4Q7RTT9 530 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 ABI3BPQ7Z7G0 1075 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 CACUL1Q86Y37 369 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 WDFY1Q8IWB7 410 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 OR2L2Q8NH16 312 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 YIPF6Q96EC8 236 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 OTUB1Q96FW1 271 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 TMEM209Q96SK2 561 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 GAD1Q99259 594 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 NIPSNAP1Q9BPW8 284 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 VPS25Q9BRG1 176 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 HCN3Q9P1Z3 774 aa8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 PPIEQ9UNP9 301 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-203ENST00000447025 SLC7A11Q9UPY5 501 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms