RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ZNF284Q2VY69 593 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 FLYWCH1Q4VC44 716 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 KLHL22Q53GT1 634 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 PYDC2Q56P42 97 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 ZNF628Q5EBL2 1059 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 TCEAL6Q6IPX3 200 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 HSD17B13Q7Z5P4 300 aaPredicted RBP12.38□□□□□ -0.43
DDX56-206ENST00000446987 SPATA22Q8NHS9 363 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 PIH1D2Q8WWB5 315 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 TCEAL3Q969E4 200 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 ULK4Q96C45 1275 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 TRIB3Q96RU7 358 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 SEC22CQ9BRL7 303 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 PRR14Q9BWN1 585 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 ZNF436Q9C0F3 470 aaPredicted RBP12.38□□□□□ -0.43
DDX56-206ENST00000446987 MED28Q9H204 178 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 GLOD4Q9HC38 313 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 KCMF1Q9P0J7 381 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 EPHA6Q9UF33 1036 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 EIF2B4Q9UI10 523 aaKnown RBP12.38□□□□□ -0.43
DDX56-206ENST00000446987 TINAGQ9UJW2 476 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 UTS2RQ9UKP6 389 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 IKZF3Q9UKT9 509 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 PCDHGA5Q9Y5G8 931 aa12.38□□□□□ -0.43
DDX56-206ENST00000446987 BPTFQ12830 3046 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 HYKKA2RU49 373 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 LRRC72A6NJI9 287 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 SMLR1H3BR10 107 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 SSX5O60225 188 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 GFRA3O60609 400 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
DDX56-206ENST00000446987 SEMG1P04279 462 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 STOMP27105 288 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 MAPK1P28482 360 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 CD86P42081 329 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 FOXA1P55317 472 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 PPP3R1P63098 170 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 RPA4Q13156 261 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 SSX1Q16384 188 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 TSTQ16762 297 aaKnown RBP12.37□□□□□ -0.43
DDX56-206ENST00000446987 NHLRC3Q5JS37 347 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 PTGR2Q8N8N7 351 aaPredicted RBP12.37□□□□□ -0.43
DDX56-206ENST00000446987 UXS1Q8NBZ7 420 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 C7orf57Q8NEG2 295 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 CLHC1Q8NHS4 586 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 SLC13A3Q8WWT9 602 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 RAB7BQ96AH8 199 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 DIRAS2Q96HU8 199 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 SLC25A51Q9H1U9 297 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 GAREM1Q9H706 876 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 ANKRA2Q9H9E1 313 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 GALNT9Q9HCQ5 603 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 ABCB9Q9NP78 766 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 PDP1Q9P0J1 537 aaPredicted RBP12.37□□□□□ -0.43
DDX56-206ENST00000446987 RAI2Q9Y5P3 530 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 PTGDR2Q9Y5Y4 395 aa12.37□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3DA0A087WVF3 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3IA0A087WXS9 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3EA0A087X179 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3KA0A087X1G2 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 GLYATL1P3A0A0U1RQE8 302 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 A0A1W2PQU0 124 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3FA6NER0 549 aaPredicted RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 A8MVJ9 347 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3LB9A6J9 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 PSIP1O75475 530 aaKnown RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 CCNDBP1O95273 360 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 MLYCDO95822 493 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 SERPINA1P01009 418 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 STSP08842 583 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 FGF2P09038 288 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3HP0C7X1 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 GABRB1P18505 474 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 PSMA1P25786 263 aaKnown RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 MAT2AP31153 395 aaKnown RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 ITKQ08881 620 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 SPEM2Q0P670 501 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 KIAA0040Q15053 153 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 PTCHD3Q3KNS1 767 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 Q3ZCU0 254 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 C6orf136Q5SQH8 315 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 HECTD2Q5U5R9 776 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 RNLSQ5VYX0 342 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3GQ6DHY5 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3CQ6IPX1 549 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 RGS7BPQ6MZT1 257 aaPredicted RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 ZNF605Q86T29 641 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 SYT12Q8IV01 421 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 TBC1D3Q8IZP1 549 aaPredicted RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 MS4A15Q8N5U1 240 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 OR2T4Q8NH00 348 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 OR10A6Q8NH74 314 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 CDC26Q8NHZ8 85 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 PIGKQ92643 395 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 KLK6Q92876 244 aa12.36□□□□□ -0.43
DDX56-206ENST00000446987 ZBED6CLQ96FA7 236 aaPredicted RBP12.36□□□□□ -0.43
DDX56-206ENST00000446987 EPYCQ99645 322 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms