RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 ATP6V1C1P21283 382 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 RPL9P32969 192 aaKnown RBP3.99□□□□□ -1.77
LINC00440-201ENST00000446579 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 ERVK-16P61578 105 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 BEX3Q00994 111 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 COX10Q12887 443 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 DDX39BQ13838 428 aaKnown RBP3.99□□□□□ -1.77
LINC00440-201ENST00000446579 TRIP10Q15642 601 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 CDKN3Q16667 212 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 HLA-BQ31612 363 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 KCTD21Q4G0X4 260 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 ASPHD2Q6ICH7 369 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 TAS2R42Q7RTR8 314 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 FAM131BQ86XD5 332 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 TBC1D10CQ8IV04 446 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 CCDC36Q8IYA8 594 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 DDHD1Q8NEL9 900 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 OR13C2Q8NGS9 318 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 OR4F5Q8NH21 305 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 FAM76AQ8TAV0 307 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 FBXO25Q8TCJ0 367 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 BRSK1Q8TDC3 778 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 C4orf36Q96KX1 117 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 VSTM2LQ96N03 204 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 PGLYRP2Q96PD5 576 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 USP28Q96RU2 1077 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 PLIN2Q99541 437 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 ZSCAN5AQ9BUG6 496 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 CLEC7AQ9BXN2 247 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 GCOM2Q9BZD3 368 aaPredicted RBP3.99□□□□□ -1.77
LINC00440-201ENST00000446579 NCOR1P1Q9H4R4 102 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 Q9HAA7 133 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 TRPV5Q9NQA5 729 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 NLGN3Q9NZ94 848 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 CHRNA9Q9UGM1 479 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 PTBP2Q9UKA9 531 aaKnown RBP3.99□□□□□ -1.77
LINC00440-201ENST00000446579 FZR1Q9UM11 496 aa3.99□□□□□ -1.77
LINC00440-201ENST00000446579 SYNJ2O15056 1496 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 AFF2P51816 1311 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 PRR23AA6NEV1 266 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 FAM47DPA6NHR8 397 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 TMEM110-MUSTN1A8MSY1 372 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 A8MUI8 341 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 WASH3PC4AMC7 463 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 ALOX15BO15296 676 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 MAGEC1O60732 1142 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 SDC3O75056 442 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 ANXA4P09525 319 aaPredicted RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 SLC35G4P0C7Q5 338 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 PPP2R1AP30153 589 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 NDST2P52849 883 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 NAPAP54920 295 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 CCNA1P78396 465 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 DHODHQ02127 395 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 ZP4Q12836 540 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 ENPP2Q13822 863 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 MLF2Q15773 248 aaPredicted RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 PDK4Q16654 411 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 CCDC152Q4G0S7 254 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 PWWP2BQ6NUJ5 590 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 WASH2PQ6VEQ5 465 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 LRRC70Q7Z2Q7 622 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 PYROXD2Q8N2H3 581 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 ICA1LQ8NDH6 482 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 OR5AU1Q8NGC0 362 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 OR1K1Q8NGR3 316 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 OR2T3Q8NH03 318 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 ZBTB18Q99592 522 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 TBCDQ9BTW9 1192 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 CAPS2Q9BXY5 557 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 WDR13Q9H1Z4 485 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 RPAP3Q9H6T3 665 aaPredicted RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 KAT8Q9H7Z6 458 aaKnown RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 KCNK13Q9HB14 408 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 PLEKHA3Q9HB20 300 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 LPAR2Q9HBW0 351 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 TM9SF3Q9HD45 589 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 RBM28Q9NW13 759 aaKnown RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 GPR83Q9NYM4 423 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 C6orf203Q9P0P8 240 aaPredicted RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 PURGQ9UJV8 347 aaKnown RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 IKZF3Q9UKT9 509 aa3.98□□□□□ -1.77
LINC00440-201ENST00000446579 KLF2Q9Y5W3 355 aaPredicted RBP3.98□□□□□ -1.77
LINC00440-201ENST00000446579 LOC105371242A0A075B767 164 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 A0A087X002 238 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.97□□□□□ -1.77
LINC00440-201ENST00000446579 MPTX1A8MV57 137 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 HHLA1C9JL84 531 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 K7EQM0 130 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 TRAFD1O14545 582 aaPredicted RBP3.97□□□□□ -1.77
LINC00440-201ENST00000446579 IMPA2O14732 288 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 CASQ2O14958 399 aaPredicted RBP3.97□□□□□ -1.77
LINC00440-201ENST00000446579 CFLARO15519 480 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 CIB2O75838 187 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 CLDN1O95832 211 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 MMP12P39900 470 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 PTGER3P43115 390 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 METAP1P53582 386 aa3.97□□□□□ -1.77
LINC00440-201ENST00000446579 VCPP55072 806 aaKnown RBP3.97□□□□□ -1.77
LINC00440-201ENST00000446579 GSCP56915 257 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms