RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 EMG1Q92979 244 aaKnown RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 SLC25A36Q96CQ1 311 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 PCED1BQ96HM7 432 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 DUX3Q96PT4 197 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ACCSQ96QU6 501 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 RAB11FIP5Q9BXF6 653 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 PKIBQ9C010 78 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 FAM49AQ9H0Q0 323 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 GDF3Q9NR23 364 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 TXLNGQ9NUQ3 528 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 RAB20Q9NX57 234 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 BARHL2Q9NY43 387 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 HACD3Q9P035 362 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CRLS1Q9UJA2 301 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ELF5Q9UKW6 265 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 POMT2Q9UKY4 750 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 KLHDC2Q9Y2U9 406 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 SLCO1B1Q9Y6L6 691 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 WDR19Q8NEZ3 1342 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 LOC105371242A0A075B767 164 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 TRBV4-1A0A0J9YWV2 114 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 HELTA6NFD8 242 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 FAM25EA8MYX2 175 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 H0YIV9 168 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 SH2D1BO14796 132 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 EPHB6O15197 1021 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 CTAGE5O15320 804 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 EDIL3O43854 480 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 JAK2O60674 1132 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 STK17BO94768 372 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 CALCAP01258 141 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 IGHEP01854 428 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 VTNP04004 478 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 GPIP06744 558 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 CAPN1P07384 714 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 FAM157CP0CG43 387 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 UQCRC2P22695 453 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 CASQ1P31415 396 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 CYLC1P35663 651 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 LBX1P52954 281 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 SUCLG1P53597 346 aaKnown RBP3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 SH3BGRP55822 239 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 DCDC1P59894 354 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 HERVK_113P63132 956 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 ERVK-8P63133 956 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 PJVKQ0ZLH3 352 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 KLF5Q13887 457 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 RCN1Q15293 331 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 C3AR1Q16581 482 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 DUSP5Q16690 384 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 PARP6Q2NL67 630 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 LINC01620Q4KN68 170 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 TAF3Q5VWG9 929 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 SYT10Q6XYQ8 523 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 ASRGL1Q7L266 308 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 EFCAB13Q8IY85 973 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF683Q8IZ20 524 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 TCEANCQ8N8B7 351 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 RDH11Q8TC12 318 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 SPRYD4Q8WW59 207 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 HPSE2Q8WWQ2 592 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 FBXO17Q96EF6 278 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 LURAP1Q96LR2 239 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 IL12RB2Q99665 862 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 LPAR4Q99677 370 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 NPAS2Q99743 824 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 DCTN5Q9BTE1 182 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 RBM4Q9BWF3 364 aaKnown RBP3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 ERVK-6Q9BXR3 956 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 MAGT1Q9H0U3 335 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 CXXC4Q9H2H0 198 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 MED20Q9H944 212 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 MEAF6Q9HAF1 191 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 INTS9Q9NV88 658 aaKnown RBP3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 ETNK2Q9NVF9 386 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 AP4B1Q9Y6B7 739 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 FGD5Q6ZNL6 1462 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 CEP170Q5SW79 1584 aa3.85□□□□□ -1.79
HMGB1P48-201ENST00000446155 TOP2BQ02880 1626 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 A0A087WZ39 114 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 A0A087X002 238 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 SHISA7A6NL88 538 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 LRRC30A6NM36 301 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 H3BTX0 84 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 KLF11O14901 512 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 ARPC3O15145 178 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZSCAN12O43309 604 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR1F1O43749 312 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 CAVIN2O95810 425 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 EDN1P05305 212 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 MBL2P11226 248 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 PSMA2P25787 234 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 CHRNB4P30926 498 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 GRIA1P42261 906 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 TNNT2P45379 298 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 RPS4XP62701 263 aaKnown RBP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 RPL23AP62750 156 aaKnown RBP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 CDKL1Q00532 357 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 SRSF9Q13242 221 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 CAMK4Q16566 473 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms