RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 WDR81Q562E7 1941 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 SDC3O75056 442 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 PRKD3O94806 890 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 PENKP01210 267 aaPredicted RBP11.16□□□□□ -0.62
FN1-212ENST00000446046 RTP2Q5QGT7 225 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 SHQ1Q6PI26 577 aaKnown RBP11.16□□□□□ -0.62
FN1-212ENST00000446046 MARCH9Q86YJ5 346 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 ZNF619Q8N2I2 560 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 TIMM29Q9BSF4 260 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 MOV10Q9HCE1 1003 aaKnown RBP11.16□□□□□ -0.62
FN1-212ENST00000446046 ZNF69Q9UC07 566 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 PCDHGA10Q9Y5H3 936 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 THADAQ6YHU6 1953 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 DLEC1Q9Y238 1755 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 TRIM64CA6NLI5 447 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 VAMP1P23763 118 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 CLLU1OSQ5K130 101 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 TMPRSS9Q7Z410 1059 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 CBARPQ8N350 705 aaPredicted RBP11.16□□□□□ -0.62
FN1-212ENST00000446046 FITM2Q8N6M3 262 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 OR9K2Q8NGE7 335 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 GAL3ST1Q99999 423 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 OR51I1Q9H343 314 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 IGKV6D-21A0A0A0MT36 114 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 CH25HO95992 272 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 BPIP17213 487 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 KLF1Q13351 362 aaPredicted RBP11.16□□□□□ -0.62
FN1-212ENST00000446046 DPPA4Q7L190 304 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 RELL1Q8IUW5 271 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 RCBTB1Q8NDN9 531 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 MRI1Q9BV20 369 aa11.16□□□□□ -0.62
FN1-212ENST00000446046 EI24O14681 340 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 RPS3P23396 243 aaKnown RBP eCLIP11.15□□□□□ -0.623e-50■■□□□ 13.5
FN1-212ENST00000446046 CLCN2P51788 898 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 GSCP56915 257 aaPredicted RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 NKX3-2P78367 333 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 RUNDC3AQ59EK9 446 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 LCTLQ6UWM7 567 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.15□□□□□ -0.621e-8■■■□□ 16.1
FN1-212ENST00000446046 SPAG16Q8N0X2 631 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 IGSF8Q969P0 613 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 ZFP57Q9NU63 452 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 NUFIP1Q9UHK0 495 aaKnown RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 FEZF1A0PJY2 475 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 CENPBD1B2RD01 187 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 FAM189A1O60320 539 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 GNAO1P09471 354 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 TRA2BP62995 288 aaKnown RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 UBALD2Q8IYN6 164 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 APCDD1Q8J025 514 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 SCAMP4Q969E2 229 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 MALT1Q9UDY8 824 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 OR2T1O43869 369 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 HOXA11P31270 313 aaPredicted RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 GSK3BP49841 420 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 PNCKQ6P2M8 343 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 DTD2Q96FN9 168 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 ATG5Q9H1Y0 275 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 EURLQ9NYK6 297 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 ACTR10Q9NZ32 417 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 CPNE7Q9UBL6 633 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 MKLN1Q9UL63 735 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 FARSAQ9Y285 508 aaKnown RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 MBLAC1A4D2B0 266 aaPredicted RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 SLC19A2O60779 497 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 WDPCPO95876 746 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 DIO3P55073 304 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 BLMHQ13867 455 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 PTGR1Q14914 329 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 NDUFAF5Q5TEU4 345 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 ZC3H3Q8IXZ2 948 aaKnown RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 CCDC71LQ8N9Z2 235 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 ZNF384Q8TF68 577 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 OR5B2Q96R09 309 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 LMF2Q9BU23 707 aaKnown RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 POTEKPQ9BYX7 375 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 PRSS38A1L453 326 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 FBP2O00757 339 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 SCAMP2O15127 329 aaKnown RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 IFNA7P01567 189 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 TPTEP56180 551 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 CLDN10P78369 228 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 UBQLNLQ8IYU4 475 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 HS3ST5Q8IZT8 346 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 TRMT10AQ8TBZ6 339 aaKnown RBP11.15□□□□□ -0.62
FN1-212ENST00000446046 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
FN1-212ENST00000446046 MYADML2A6NDP7 307 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 DNAJB5O75953 348 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 P2RY2P41231 377 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 ERVK-16P61578 105 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 FGL1Q08830 312 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 MLF2Q15773 248 aaPredicted RBP11.15□□□□□ -0.63
FN1-212ENST00000446046 OR1J2Q8NGS2 313 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 TMBIM1Q969X1 311 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 PEBP4Q96S96 227 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 GPN2Q9H9Y4 310 aaPredicted RBP11.15□□□□□ -0.63
FN1-212ENST00000446046 ST14Q9Y5Y6 855 aa11.15□□□□□ -0.63
FN1-212ENST00000446046 LSM1O15116 133 aaKnown RBP11.14□□□□□ -0.63
FN1-212ENST00000446046 ACADVLP49748 655 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms