RNA–Protein interactions for RNA: ENST00000442921.6

PTPRO-203, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-203ENST00000442921 POLR3HQ9Y535 204 aaPredicted RBP4.87□□□□□ -1.63
PTPRO-203ENST00000442921 COL1A2P08123 1366 aa4.87□□□□□ -1.63
PTPRO-203ENST00000442921 MCM3APO60318 1980 aa4.87□□□□□ -1.63
PTPRO-203ENST00000442921 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 H7C2Y5 167 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 I3L521 148 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 DNASE2O00115 360 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 UGT2B11O75310 529 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 USP12O75317 370 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 LYPLA1O75608 230 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 TOP3BO95985 862 aaKnown RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CHRNGP07510 517 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 BDKRB2P30411 391 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 OTX1P32242 354 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CSKP41240 450 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 GABRA4P48169 554 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 LHX1P48742 406 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PRKAA2P54646 552 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PSME3P61289 254 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 SLC25A3Q00325 362 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 E2F1Q01094 437 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 KLF10Q13118 480 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 BFSP2Q13515 415 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 TRA2AQ13595 282 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 TP53BP2Q13625 1128 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 Q5BKY6 102 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 COLEC12Q5KU26 742 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 OTUD1Q5VV17 481 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 NKAIN2Q5VXU1 208 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CD276Q5ZPR3 534 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 OR6B2Q6IFH4 312 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ALKAL1Q6UXT8 129 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 C16orf62Q7Z3J2 963 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 RTN4RL1Q86UN2 441 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 METTL23Q86XA0 190 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 C10orf107Q8IVU9 208 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 UNC5BQ8IZJ1 945 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ZNF786Q8N393 782 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 OR4M1Q8NGD0 313 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 OR5D18Q8NGL1 313 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 OR14C36Q8NHC7 312 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 RDH11Q8TC12 318 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 TMCO6Q96DC7 493 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 MRPL38Q96DV4 380 aaKnown RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 BSCL2Q96G97 398 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ZNF764Q96H86 408 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 C5orf34Q96MH7 638 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 HBEGFQ99075 208 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 RBBP8Q99708 897 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CPNE1Q99829 537 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ZNF701Q9NV72 531 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PNPOQ9NVS9 261 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 GPATCH2LQ9NWQ4 482 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 NDUFAF4Q9P032 175 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 TMEM216Q9P0N5 145 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 RIMS3Q9UJD0 308 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 KLHL21Q9UJP4 597 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ZDHHC8Q9ULC8 765 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PSMD13Q9UNM6 376 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 MMACHCQ9Y4U1 282 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 TMEM265A0A087WTH1 108 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 SLC5A10A0PJK1 596 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 WDR27A2RRH5 827 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PMPCBO75439 489 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 LDLRP01130 860 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 MPOP05164 745 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 SBK3P0C264 359 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CKMT1AP12532 417 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 FOLR2P14207 255 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CCNOP22674 350 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PTPN6P29350 595 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 SDC4P31431 198 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CEBPDP49716 269 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 LIMK2P53671 638 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 AQP4P55087 323 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ZNF45Q02386 682 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 SP3Q02447 781 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 FSCN1Q16658 493 aaKnown RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 HNRNPA1L2Q32P51 320 aaKnown RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 NDUFAF6Q330K2 333 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PARP15Q460N3 678 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PIGGQ5H8A4 983 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 FBXO46Q6PJ61 603 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 CD300LDQ6UXZ3 194 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ZCCHC23Q6ZST2 131 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 FRMD7Q6ZUT3 714 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 AMIGO1Q86WK6 493 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 APOBEC3FQ8IUX4 373 aaKnown RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 DDIASQ8IXT1 998 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 LRRC52Q8N7C0 313 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ZNF610Q8N9Z0 462 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 BEND2Q8NDZ0 799 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 BEST2Q8NFU1 509 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 OR10T2Q8NGX3 314 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 ASB11Q8WXH4 323 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 RSC1A1Q92681 617 aa4.86□□□□□ -1.63
PTPRO-203ENST00000442921 RBPMSQ93062 196 aaKnown RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 PPWD1Q96BP3 646 aaKnown RBP4.86□□□□□ -1.63
PTPRO-203ENST00000442921 AP2M1Q96CW1 435 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms