RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SERPINA11Q86U17 422 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CALHM3Q86XJ0 350 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SPPL2CQ8IUH8 684 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 MICU2Q8IYU8 434 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 DTWD1Q8N5C7 304 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 UCN3Q969E3 161 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NSMCE2Q96MF7 247 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF285Q96NJ3 590 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SMOC1Q9H4F8 434 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 LYRM4Q9HD34 91 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 KCMF1Q9P0J7 381 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 AP4S1Q9Y587 144 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SNX8Q9Y5X2 465 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 LY6G6EA0A0G2JKS1 128 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 TCRBV3S1A0A5B6 114 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 FAM86C2PA6NEL3 165 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 WASHC1A8K0Z3 465 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GALR2O43603 387 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CTSBP07858 339 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GGT1P19440 569 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CHI3L1P36222 383 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 OR3A3P47888 321 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 OLR1P78380 273 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 DAB2P98082 770 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 HSPB3Q12988 150 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF846Q147U1 533 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 MLC1Q15049 377 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GARNL3Q5VVW2 1013 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 METTL11BQ5VVY1 283 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ZC3H14Q6PJT7 736 aaKnown RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 PRSS42Q7Z5A4 293 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 KMT5CQ86Y97 462 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CLEC4FQ8N1N0 589 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 PQLC1Q8N2U9 271 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 KLHL6Q8WZ60 621 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 NUDT22Q9BRQ3 303 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 DCUN1D5Q9BTE7 237 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 NPLQ9BXD5 320 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 SEMA5BQ9P283 1151 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CES1P1Q9UKY3 287 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 KLF2Q9Y5W3 355 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF780BQ9Y6R6 833 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 R4GN57 208 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 U3KQA8 63 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ATP6V1G2-DDX39BF2Z307 99 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CPNE6O95741 557 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CSNK2A2P19784 350 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 UQCRC2P22695 453 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GPC1P35052 558 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GZMMP51124 257 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 DUSP3P51452 185 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 SQSTM1Q13501 440 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GRM7Q14831 915 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 RGNQ15493 299 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GRAMD1BQ3KR37 738 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 SPDYE7PQ495Y7 208 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 PERM1Q5SV97 790 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 TMEM71Q6P5X7 295 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ERICH5Q6P6B1 374 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 PLEKHG7Q6ZR37 379 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 C10orf111Q8N326 155 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 TTC29Q8NA56 475 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 OR52N2Q8NGI0 321 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 OR9A4Q8NGU2 314 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 FIG4Q92562 907 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 AMDHD1Q96NU7 426 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 RBM14Q96PK6 669 aaKnown RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 USB1Q9BQ65 265 aaKnown RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 EFHD1Q9BUP0 239 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 RAD21L1Q9H4I0 556 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CXorf36Q9H7Y0 433 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 TIGARQ9NQ88 270 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 PRDM9Q9NQV7 894 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 RIMS3Q9UJD0 308 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CDC14AQ9UNH5 594 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CLCA2Q9UQC9 943 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 TNRC6BQ9UPQ9 1833 aaKnown RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 TRAV6A0A075B6T7 132 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 RNF103-CHMP3A0A140T963 221 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 A0A1W2PPW3 197 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 HYKKA2RU49 373 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 SGK494L7N484 410 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 TOX3O15405 576 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ADAM11O75078 769 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CLPXO76031 633 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 C1QCP02747 245 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 IL10P22301 178 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 MPIP34949 423 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 IDUAP35475 653 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 NCBP2P52298 156 aaKnown RBP eCLIP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 COL9A2Q14055 689 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 FAM53BQ14153 422 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 FGD3Q5JSP0 725 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 PXDC1Q5TGL8 231 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 UBE2UQ5VVX9 321 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CPZQ66K79 652 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GPR155Q7Z3F1 870 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ARHGEF39Q8N4T4 335 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 PSD4Q8NDX1 1056 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 OR5AK3PQ8NH89 298 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms