RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TBX1O43435 398 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 VEGFDO43915 354 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 TMCC2O75069 709 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SEMA3DO95025 777 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 MED26O95402 600 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 TSPAN12O95859 305 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 F12P00748 615 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 IFNA2P01563 188 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SLC4A1P02730 911 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 RAF1P04049 648 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 HOXD4P09016 255 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 GSTM1P09488 218 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 HOXB1P14653 301 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CTPS1P17812 591 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 IDSP22304 550 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SLC6A2P23975 617 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 MSX1P28360 303 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ERP29P30040 261 aaKnown RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CD68P34810 354 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 PTGS2P35354 604 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SESN2P58004 480 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ISL1P61371 349 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CSNK2BP67870 215 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 IRF9Q00978 393 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CD47Q08722 323 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SLC10A7Q0GE19 358 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 TRAF3Q13114 568 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 BAMBIQ13145 260 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CDK5R2Q13319 367 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 KEAP1Q14145 624 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 PTPRRQ15256 657 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 MEP1AQ16819 746 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 HENMT1Q5T8I9 393 aaKnown RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 AGAP9Q5VTM2 703 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 C1orf189Q5VU69 101 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ZNF691Q5VV52 312 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 TIGD3Q6B0B8 471 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ZNF470Q6ECI4 717 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 LETMD1Q6P1Q0 360 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CNSTQ6PJW8 725 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ARHGAP36Q6ZRI8 547 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 KCTD20Q7Z5Y7 419 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 RETREG3Q86VR2 466 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 OOSP2Q86WS3 158 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ARHGAP12Q8IWW6 846 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 GPR135Q8IZ08 494 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 NPWQ8N729 165 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 OR1L3Q8NH93 324 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 AGR3Q8TD06 166 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 PIH1D2Q8WWB5 315 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ASB5Q8WWX0 329 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SLC38A4Q969I6 547 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 LRRC58Q96CX6 371 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 VPS39Q96JC1 886 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SCYL1Q96KG9 808 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CEP19Q96LK0 163 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SECISBP2Q96T21 854 aaKnown RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 MBOAT4Q96T53 435 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 RBM4BQ9BQ04 359 aaKnown RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 TIMM29Q9BSF4 260 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 RBM4Q9BWF3 364 aaKnown RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 DGCR6LQ9BY27 220 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 UGT2B28Q9BY64 529 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ALOXE3Q9BYJ1 711 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 RNF32Q9H0A6 362 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 TOR3AQ9H497 397 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 RHOJQ9H4E5 214 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 NIPAL2Q9H841 368 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 NEUROD4Q9HD90 331 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CCNB1IP1Q9NPC3 277 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 KCNJ16Q9NPI9 418 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 NPDC1Q9NQX5 325 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CHRAC1Q9NRG0 131 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ADPRHL2Q9NX46 363 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 B3GNT2Q9NY97 397 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 BFARQ9NZS9 450 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 CCDC167Q9P0B6 97 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 SLC17A6Q9P2U8 582 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 ACOT9Q9Y305 439 aa6.07□□□□□ -1.44
HDAC6-210ENST00000441703 A0A0J9YYE9 177 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 ZCWPW2A0A1B0GU75 182 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 A0A1W2PQ72 361 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 LINC00862A6NCI5 91 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 NKX2-6A6NCS4 301 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 ERI2A8K979 691 aaKnown RBP6.06□□□□□ -1.44
HDAC6-210ENST00000441703 C12orf71A8MTZ7 269 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 E9PLN8 166 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 H3BMM5 538 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 TRIM77I1YAP6 450 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 FXYD1O00168 92 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 EEF2KO00418 725 aaKnown RBP6.06□□□□□ -1.44
HDAC6-210ENST00000441703 PRRG2O14669 202 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
HDAC6-210ENST00000441703 PSMD3O43242 534 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 ZNF749O43361 778 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 FZD6O60353 706 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 TRIM3O75382 744 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-210ENST00000441703 TRBC1P01850 177 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 FGF4P08620 206 aa6.06□□□□□ -1.44
HDAC6-210ENST00000441703 RAP2AP10114 183 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms