RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 THY1P04216 161 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 STMN1P16949 149 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 SFNP31947 248 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 MAGEA4P43358 317 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 NUMBP49757 651 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 LTB4RQ15722 352 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 CD226Q15762 336 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 PPP1R3AQ16821 1122 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 ZNF528Q3MIS6 628 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 KRT71Q3SY84 523 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 TIMM50Q3ZCQ8 353 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 CCDC40Q4G0X9 1142 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 AGKQ53H12 422 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 LIPKQ5VXJ0 399 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 PLBD1Q6P4A8 553 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 ATRAIDQ6UW56 229 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 VITQ6UXI7 678 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 BAIAP2L2Q6UXY1 529 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 WDR88Q6ZMY6 472 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 NAXDQ8IW45 347 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 U2AF1L4Q8WU68 220 aaKnown RBP3.73□□□□□ -1.81
PFDN4-202ENST00000441080 LHX4Q969G2 390 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 APOOQ9BUR5 198 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 TRIM9Q9C026 710 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 TIGARQ9NQ88 270 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.73□□□□□ -1.81
PFDN4-202ENST00000441080 CENPMQ9NSP4 180 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 SENP1Q9P0U3 644 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 ABCD2Q9UBJ2 740 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 RSPH14Q9UHP6 348 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 RPH3AQ9Y2J0 694 aaPredicted RBP3.73□□□□□ -1.81
PFDN4-202ENST00000441080 NAALAD2Q9Y3Q0 740 aa3.73□□□□□ -1.81
PFDN4-202ENST00000441080 PTPRUQ92729 1446 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 A0A0J9YVX5 310 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 CFAP73A6NFT4 308 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 SAP18O00422 153 aaKnown RBP3.72□□□□□ -1.81
PFDN4-202ENST00000441080 ECDO95905 644 aaPredicted RBP3.72□□□□□ -1.81
PFDN4-202ENST00000441080 IGHV3-9P01782 118 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 CCDC192P0DO97 292 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 SGSHP51688 502 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 RAG2P55895 527 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 HAND2P61296 217 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 MYBPC1Q00872 1141 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 ZNF85Q03923 595 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 WASHC5Q12768 1159 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 BNIP1Q12981 228 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 ZKSCAN8Q15776 578 aaPredicted RBP3.72□□□□□ -1.81
PFDN4-202ENST00000441080 ADGRD2Q7Z7M1 963 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 AMZ2Q86W34 360 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 GPBP1Q86WP2 473 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 OR4F17Q8NGA8 305 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 OR52J3Q8NH60 311 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 ZPLD1Q8TCW7 415 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 CCDC47Q96A33 483 aaKnown RBP3.72□□□□□ -1.81
PFDN4-202ENST00000441080 NSMCE2Q96MF7 247 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 OR4F4Q96R69 305 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 RANBP9Q96S59 729 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 SPXQ9BT56 116 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 TSPY26PQ9H489 355 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 ALG9Q9H6U8 611 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 STARD5Q9NSY2 213 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 CCPG1Q9ULG6 757 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 TP53TG3Q9ULZ0 132 aa3.72□□□□□ -1.81
PFDN4-202ENST00000441080 ZMYM6O95789 1325 aa3.71□□□□□ -1.81
PFDN4-202ENST00000441080 POGZQ7Z3K3 1410 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 IGLV3-10A0A075B6K4 115 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 A0A1B0GVY2 172 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 MFSD2BA6NFX1 497 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 PRAMEF12O95522 483 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 ALPPP05187 535 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 ALPPL2P10696 532 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 UMPSP11172 480 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 PVRP15151 417 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 ACP1P24666 158 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 SLC6A8P48029 635 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 NOP14P78316 857 aaKnown RBP3.71□□□□□ -1.82
PFDN4-202ENST00000441080 SMC1AQ14683 1233 aaKnown RBP3.71□□□□□ -1.82
PFDN4-202ENST00000441080 SLC10A1Q14973 349 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 MICAQ29983 383 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 MS4A13Q5J8X5 152 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 IL23RQ5VWK5 629 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 OR6B2Q6IFH4 312 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 RAB12Q6IQ22 244 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 CCBE1Q6UXH8 406 aaPredicted RBP3.71□□□□□ -1.82
PFDN4-202ENST00000441080 PRSS48Q7RTY5 328 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 TSEN54Q7Z6J9 526 aaKnown RBP3.71□□□□□ -1.82
PFDN4-202ENST00000441080 CD177Q8N6Q3 437 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 ZNF397Q8NF99 534 aaPredicted RBP3.71□□□□□ -1.82
PFDN4-202ENST00000441080 VN1R17PQ8TDU5 208 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 PIWIL1Q96J94 861 aaKnown RBP3.71□□□□□ -1.82
PFDN4-202ENST00000441080 TSPAN18Q96SJ8 248 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 NDUFAF3Q9BU61 184 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 PRODH2Q9UF12 536 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 PURGQ9UJV8 347 aaKnown RBP3.71□□□□□ -1.82
PFDN4-202ENST00000441080 FKBP7Q9Y680 259 aa3.71□□□□□ -1.82
PFDN4-202ENST00000441080 A0A1W2PQ72 361 aa3.7□□□□□ -1.82
PFDN4-202ENST00000441080 LRIT2A6NDA9 550 aa3.7□□□□□ -1.82
PFDN4-202ENST00000441080 CCT8L1PA6NM43 557 aa3.7□□□□□ -1.82
PFDN4-202ENST00000441080 STK17BO94768 372 aa3.7□□□□□ -1.82
PFDN4-202ENST00000441080 WNT2P09544 360 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms