RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CRHR1P34998 444 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 GSTM5P46439 218 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 TRPC1P48995 793 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 NUP107P57740 925 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 IFFO1Q0D2I5 559 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 ZNF763Q0D2J5 394 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 EMC4Q5J8M3 183 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 FRMD7Q6ZUT3 714 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 CCDC116Q8IYX3 515 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 OR9A2Q8NGT5 310 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 C16orf78Q8WTQ4 265 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 OMA1Q96E52 524 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 HSPBAP1Q96EW2 488 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 BBS4Q96RK4 519 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 KLRF1Q9NZS2 232 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 HRH3Q9Y5N1 445 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 APCP25054 2843 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 ANKRD33BA6NCL7 494 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 ACOX3O15254 700 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 PPM1BO75688 479 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 BCAS2O75934 225 aaPredicted RBP18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 FOXA1P55317 472 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 DCAF7P61962 342 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 RAE1P78406 368 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 DUSP2Q05923 314 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 TRMT12Q53H54 448 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 C1orf185Q5T7R7 199 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 LIPMQ5VYY2 423 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 CCDC71Q8IV32 467 aaPredicted RBP18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 FAM9CQ8IZT9 166 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 SHCBP1LQ9BZQ2 653 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 KCNJ16Q9NPI9 418 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 RRAGDQ9NQL2 400 aaPredicted RBP18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 EHD3Q9NZN3 535 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 SPRR3Q9UBC9 169 aa18.21■□□□□ 0.51
SHROOM1-204ENST00000440118 ENO4A6NNW6 628 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 UBFD1O14562 309 aaKnown RBP18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 TRIM3O75382 744 aaPredicted RBP18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 CBX7O95931 251 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 GABRA1P14867 456 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 S1PR1P21453 382 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 KRT20P35900 424 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 DNAJB13P59910 316 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 C2orf80Q0P641 193 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 MGAT2Q10469 447 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 MEX3BQ6ZN04 569 aaKnown RBP18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 LURAP1LQ8IV03 231 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 NEIL3Q8TAT5 605 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 ZNF675Q8TD23 568 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 KAT2AQ92830 837 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 ZNF681Q96N22 645 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 OSBPL11Q9BXB4 747 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 PROK2Q9HC23 129 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 ACKR4Q9NPB9 350 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 SLC35C2Q9NQQ7 365 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 OXSMQ9NWU1 459 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 FIS1Q9Y3D6 152 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 POLR3HQ9Y535 204 aaPredicted RBP18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 HCFC1P51610 2035 aa18.2■□□□□ 0.5
SHROOM1-204ENST00000440118 NKX2-6A6NCS4 301 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 FAM47E-STBD1D6RA91 191 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 GNB5O14775 395 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ABCB1P08183 1280 aaPredicted RBP18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 UROSP10746 265 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 NAGAP17050 411 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ENDOUP21128 410 aaKnown RBP18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ELAVL4P26378 380 aaKnown RBP18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 NTSP30990 170 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 MPIP34949 423 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 GCKP35557 465 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 CASP3P42574 277 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ZNF155Q12901 538 aaPredicted RBP18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 DUSP8Q13202 625 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ZNF628Q5EBL2 1059 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 GALNT18Q6P9A2 607 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ANGPTL8Q6UXH0 198 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 SIMC1Q8NDZ2 872 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 CTHRC1Q96CG8 243 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 TTYH2Q9BSA4 534 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ANGPTL4Q9BY76 406 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 C12orf65Q9H3J6 166 aaKnown RBP18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 ZNF639Q9UID6 485 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 C15orf41Q9Y2V0 281 aa18.19■□□□□ 0.5
SHROOM1-204ENST00000440118 FRG2CA6NGY1 282 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 REM1O75628 298 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 RSL1D1O76021 490 aaKnown RBP18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 CHEK2O96017 543 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 HOXD4P09016 255 aaPredicted RBP18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 DDCP20711 480 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 IL12BP29460 328 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 KIR3DL1P43629 444 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 PPICP45877 212 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 NCBP2P52298 156 aaKnown RBP eCLIP18.18■□□□□ 0.53e-6■■□□□ 12.6
SHROOM1-204ENST00000440118 SH2D5Q6ZV89 423 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 NUP54Q7Z3B4 507 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 RIBC1Q8N443 379 aaPredicted RBP18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 OR1J4Q8NGS1 313 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 OR2W6PQ8NHA6 318 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 LILRB4Q8NHJ6 448 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 ERP27Q96DN0 273 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms