RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 DNAJC13O75165 2243 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 FAM166BA8MTA8 275 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 TMEM114B3SHH9 223 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 ZNHIT1O43257 154 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 SKAP2O75563 359 aaPredicted RBP21.75■■□□□ 1.07
VARS-217ENST00000440048 BCAS2O75934 225 aaPredicted RBP21.75■■□□□ 1.07
VARS-217ENST00000440048 GLSO94925 669 aaPredicted RBP21.75■■□□□ 1.07
VARS-217ENST00000440048 JUNP05412 331 aaKnown RBP21.75■■□□□ 1.07
VARS-217ENST00000440048 ABCD3P28288 659 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 CA7P43166 264 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 NCBP2P52298 156 aaKnown RBP eCLIP21.75■■□□□ 1.07
VARS-217ENST00000440048 FBXW4P57775 412 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 ABCE1P61221 599 aaKnown RBP21.75■■□□□ 1.07
VARS-217ENST00000440048 PRAMEF20Q5VT98 475 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 SPPL2CQ8IUH8 684 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 LCORQ96JN0 433 aaPredicted RBP21.75■■□□□ 1.07
VARS-217ENST00000440048 PPP3R2Q96LZ3 170 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 C3orf30Q96M34 536 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 TSSK3Q96PN8 268 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 IL1RL2Q9HB29 575 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 PROK2Q9HC23 129 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 PLEKHB1Q9UF11 243 aaPredicted RBP21.75■■□□□ 1.07
VARS-217ENST00000440048 BAIAP2L1Q9UHR4 511 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 NOTCH2Q04721 2471 aa21.75■■□□□ 1.07
VARS-217ENST00000440048 ACOT7O00154 380 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 PLOD3O60568 738 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 PEX11AO75192 247 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 LRATO95237 230 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 BCKDHAP12694 445 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 NTSP30990 170 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 PPICP45877 212 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 TMED10P49755 219 aaKnown RBP21.74■■□□□ 1.07
VARS-217ENST00000440048 PER3P56645 1201 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 RPS6KA2Q15349 733 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 C3AR1Q16581 482 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 Q6ZPB1 254 aaPredicted RBP21.74■■□□□ 1.07
VARS-217ENST00000440048 RGS9BPQ6ZS82 235 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 FGD2Q7Z6J4 655 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 SLC22A16Q86VW1 577 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 OR7G2Q8NG99 324 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 CLHC1Q8NHS4 586 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 DEFB127Q9H1M4 99 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 GLIPR2Q9H4G4 154 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 SH3BGRL2Q9UJC5 107 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.74■■□□□ 1.07
VARS-217ENST00000440048 PCNX1Q96RV3 2341 aa21.74■■□□□ 1.07
VARS-217ENST00000440048 ATP6AP2A0A1C7CYW4 349 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 TP53I11O14683 189 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 AKAP10O43572 662 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 CDC40O60508 579 aaKnown RBP eCLIP21.73■■□□□ 1.07
VARS-217ENST00000440048 NME6O75414 186 aaPredicted RBP21.73■■□□□ 1.07
VARS-217ENST00000440048 ATP6AP2O75787 350 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 BGNP21810 368 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 DRD5P21918 477 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 DCAF7P61962 342 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 ANKRD26P1Q6NSI1 321 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 TMEM251Q8N6I4 163 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 ANKRD42Q8N9B4 389 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 HSPBAP1Q96EW2 488 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 AMDHD1Q96NU7 426 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 PAIP2Q9BPZ3 127 aaKnown RBP21.73■■□□□ 1.07
VARS-217ENST00000440048 C20orf27Q9GZN8 174 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 REEP4Q9H6H4 257 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 ZDHHC11Q9H8X9 412 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 TMBIM4Q9HC24 238 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 PLSCR2Q9NRY7 297 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 TINAGQ9UJW2 476 aa21.73■■□□□ 1.07
VARS-217ENST00000440048 GPR55Q9Y2T6 319 aaPredicted RBP21.73■■□□□ 1.07
VARS-217ENST00000440048 NBPF19A0A087WUL8 3843 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 A0A1B0GTH9 108 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 CCL21O00585 134 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 ACOX3O15254 700 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 PDE9AO76083 593 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 ABOP16442 354 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 NAGAP17050 411 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 GRK2P25098 689 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 SLC1A6P48664 564 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 CASP6P55212 293 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 KCNJ2P63252 427 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 CASP8Q14790 479 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 HYAL4Q2M3T9 481 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 ATP6AP1LQ52LC2 224 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 ZNF385BQ569K4 471 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 HHATQ5VTY9 493 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 ZNF781Q8N8C0 355 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 SPPL2AQ8TCT8 520 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 DIO2Q92813 273 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 OMA1Q96E52 524 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 ZNF764Q96H86 408 aaPredicted RBP21.72■■□□□ 1.07
VARS-217ENST00000440048 NCKAP5O14513 1909 aa21.72■■□□□ 1.07
VARS-217ENST00000440048 A0A087WV62 115 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 TMEM120BA0PK00 339 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 FRG2CA6NGY1 282 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 TO15178 435 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 TBX19O60806 448 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 PPM1BO75688 479 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 SLITRK5O94991 958 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 ABCB1P08183 1280 aaPredicted RBP21.71■■□□□ 1.07
VARS-217ENST00000440048 MAPK1P28482 360 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 MC3RP41968 323 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms