RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 APOOQ9BUR5 198 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 TMEM231Q9H6L2 316 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 ALG9Q9H6U8 611 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 Q9HAA7 133 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 NGBQ9NPG2 151 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 HOMER3Q9NSC5 361 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 GTSE1Q9NYZ3 720 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 SPATA2Q9UM82 520 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 PLEKHA6Q9Y2H5 1048 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 WDR97A6NE52 1622 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 ALKQ9UM73 1620 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 SETBP1Q9Y6X0 1596 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 PTPRTO14522 1441 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 ABCC4O15439 1325 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 A0A0A6YYD4 124 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 A0A1B0GTH9 108 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 ACOD1A6NK06 481 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 GALR3O60755 368 aaPredicted RBP2.78□□□□□ -1.96
VPS41-207ENST00000439468 RENP00797 406 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 IGHV3-13P01766 116 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 APRTP07741 180 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 GATA1P15976 413 aaPredicted RBP2.78□□□□□ -1.96
VPS41-207ENST00000439468 SHC1P29353 583 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 SPRP35270 261 aaPredicted RBP2.78□□□□□ -1.96
VPS41-207ENST00000439468 SAA4P35542 130 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 SLC6A8P48029 635 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 POU3F4P49335 361 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 HAND2P61296 217 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 MYBPC1Q00872 1141 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 ZFP36L1Q07352 338 aaKnown RBP2.78□□□□□ -1.96
VPS41-207ENST00000439468 PCK2Q16822 640 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 ANKRD55Q3KP44 614 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 TOR1AIP1Q5JTV8 583 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 DDI2Q5TDH0 399 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 SEL1L2Q5TEA6 688 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 AGAP7PQ5VUJ5 663 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 RAET1GQ6H3X3 334 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 FAM159AQ6UWV7 190 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 DPY19L2P2Q6ZN68 376 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 GET4Q7L5D6 327 aaPredicted RBP2.78□□□□□ -1.96
VPS41-207ENST00000439468 ERASQ7Z444 233 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 SLC25A42Q86VD7 318 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 SLC47A2Q86VL8 602 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 PYROXD2Q8N2H3 581 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 RNF148Q8N7C7 305 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 MINDY2Q8NBR6 621 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 CNNM3Q8NE01 707 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 C17orf47Q8NEP4 570 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 FCGR1BQ92637 280 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 MCHR2Q969V1 340 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 BIRC7Q96CA5 298 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 ATF6BQ99941 703 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 ST6GALNAC5Q9BVH7 336 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 FTHL17Q9BXU8 183 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 NACA2Q9H009 215 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 RAB17Q9H0T7 212 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 YAE1D1Q9NRH1 226 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 SLC7A10Q9NS82 523 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 STARD5Q9NSY2 213 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 DHRS4-AS1Q9P1J3 65 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 SEC14L4Q9UDX3 406 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 TUBGCP4Q9UGJ1 667 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 HOOK1Q9UJC3 728 aaKnown RBP2.78□□□□□ -1.96
VPS41-207ENST00000439468 SIGLEC1Q9BZZ2 1709 aa2.78□□□□□ -1.96
VPS41-207ENST00000439468 MAGI1Q96QZ7 1491 aaPredicted RBP2.77□□□□□ -1.97
VPS41-207ENST00000439468 IGKV6D-41A0A0C4DH26 115 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 A0A0J9YVX5 310 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 CCT8L1PA6NM43 557 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 CYB561D2O14569 222 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 IMPA2O14732 288 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 SDC3O75056 442 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 B3GALNT1O75752 331 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 STK17BO94768 372 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 AKR7A3O95154 331 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ECDO95905 644 aaPredicted RBP2.77□□□□□ -1.97
VPS41-207ENST00000439468 MT-ND1P03886 318 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 MELTFP08582 738 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 FCGR3AP08637 254 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 HOXD4P09016 255 aaPredicted RBP2.77□□□□□ -1.97
VPS41-207ENST00000439468 TSPAN8P19075 237 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 GATA2P23769 480 aaPredicted RBP2.77□□□□□ -1.97
VPS41-207ENST00000439468 IL4RP24394 825 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 CALML3P27482 149 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 RFC2P35250 354 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 POLR2FP61218 127 aaKnown RBP2.77□□□□□ -1.97
VPS41-207ENST00000439468 CDKL1Q00532 357 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ABRAXAS2Q15018 415 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 NHLRC3Q5JS37 347 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ACER2Q5QJU3 275 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 IRGCQ6NXR0 463 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ARMCX5Q6P1M9 558 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 APOOLQ6UXV4 268 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 OR56B1Q8NGI3 324 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 OR52J3Q8NH60 311 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ZNF671Q8TAW3 534 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ITLN1Q8WWA0 313 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 CCDC51Q96ER9 411 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 GPR174Q9BXC1 333 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 SP140LQ9H930 580 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ELL3Q9HB65 397 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms