RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 HPNP05981 417 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 ABCB1P08183 1280 aaPredicted RBP16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 IMPDH1P20839 514 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 GCAP28676 217 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 CRYZQ08257 329 aaKnown RBP16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 ACSM2AQ08AH3 577 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 LCP2Q13094 533 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 LTB4RQ15722 352 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 SPIN4Q56A73 249 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 ACSM2BQ68CK6 577 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 FAM180BQ6P0A1 224 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 ANGPTL8Q6UXH0 198 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 NUP54Q7Z3B4 507 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 LIX1LQ8IVB5 337 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 SAMD14Q8IZD0 417 aaPredicted RBP16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 ACMSDQ8TDX5 336 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 TIMP4Q99727 224 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 OSBPL11Q9BXB4 747 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 ZNF639Q9UID6 485 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 CAMK2AQ9UQM7 478 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 DLGAP4Q9Y2H0 992 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 PLLPQ9Y342 182 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 SLC6A5Q9Y345 797 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 BCAS2O75934 225 aaPredicted RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 ENO1P06733 434 aaKnown RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 GSTA1P08263 222 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 IL3P08700 152 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 RHOXF2BP0C7M4 288 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 DRD2P14416 443 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 PCSK2P16519 638 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 POU3F2P20265 443 aaPredicted RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 PRKAA2P54646 552 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 PKNOX1P55347 436 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 MRPS35P82673 323 aaKnown RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 MGAT2Q10469 447 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 HEPACAMQ14CZ8 416 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 ERCC6LQ2NKX8 1250 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 ACSF3Q4G176 576 aaPredicted RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 TRMT12Q53H54 448 aaKnown RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 FAM219BQ5XKK7 198 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 TIGD3Q6B0B8 471 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 SLC30A6Q6NXT4 461 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 LACC1Q8IV20 430 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 CCDC116Q8IYX3 515 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 EXOSC8Q96B26 276 aaKnown RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 CNRIP1Q96F85 164 aaPredicted RBP16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 RHOXF2Q9BQY4 288 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 ACPTQ9BZG2 426 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 UBQLN3Q9H347 655 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 EHD3Q9NZN3 535 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 SENP1Q9P0U3 644 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 TBK1Q9UHD2 729 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 FREM3P0C091 2139 aa16.87■□□□□ 0.29
AC004540.1-201ENST00000439120 FRG2CA6NGY1 282 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 EPPINO95925 133 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 CBX7O95931 251 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 IL2RAP01589 272 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 PYGBP11216 843 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 CHN1P15882 459 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 DRD5P21918 477 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 BMP5P22003 454 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 UQCRC1P31930 480 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 KRT20P35900 424 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 PPICP45877 212 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 DUSP2Q05923 314 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 BTKQ06187 659 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 SNTA1Q13424 505 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 SLC29A2Q14542 456 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 SPDYAQ5MJ70 313 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 WIPI1Q5MNZ9 446 aaPredicted RBP16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 FNDC7Q5VTL7 733 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 ARSKQ6UWY0 536 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 CCNYL1Q8N7R7 359 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 CDC26Q8NHZ8 85 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 CTHRC1Q96CG8 243 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 TMCO6Q96DC7 493 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 CCDC126Q96EE4 140 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 L3HYPDHQ96EM0 354 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 ZNF681Q96N22 645 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 HEY2Q9UBP5 337 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 FETUBQ9UGM5 382 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 DCDC2Q9UHG0 476 aa16.86■□□□□ 0.29
AC004540.1-201ENST00000439120 PRAMEF25A6NGN4 478 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 ICOSLGO75144 302 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 PTPN6P29350 595 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 TIA1P31483 386 aaKnown RBP eCLIP16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 PEX19P40855 299 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 EMDP50402 254 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 HMGCS1Q01581 520 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 RCAN2Q14206 197 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 IMPG1Q17R60 797 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 EIPR1Q53HC9 387 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 VASNQ6EMK4 673 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 TMEM81Q6P7N7 255 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 SIMC1Q8NDZ2 872 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 FAM83FQ8NEG4 500 aaPredicted RBP16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 TNIP2Q8NFZ5 429 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 ZNF675Q8TD23 568 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 HGDQ93099 445 aa16.85■□□□□ 0.29
AC004540.1-201ENST00000439120 ABTB1Q969K4 478 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms