RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NTRK2Q16620 822 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 PODNL1Q6PEZ8 512 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF683Q8IZ20 524 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 HORMAD2Q8N7B1 307 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 DTX3Q8N9I9 347 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF248Q8NDW4 579 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 C7orf57Q8NEG2 295 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 MOSPD2Q8NHP6 518 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 RAB7BQ96AH8 199 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 HYLS1Q96M11 299 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 COMMD4Q9H0A8 199 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 THSD1Q9NS62 852 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 C14orf105Q9NVL8 296 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 CNIH4Q9P003 139 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 CKLFQ9UBR5 152 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 TMEFF2Q9UIK5 374 aaPredicted RBP6.34□□□□□ -1.4
CSDE1-205ENST00000438362 INSL6Q9Y581 213 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 PCDHGB2Q9Y5G2 931 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 CNTRLQ7Z7A1 2325 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 RGS9O75916 674 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SCG5P05408 212 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 LHCGRP22888 699 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SLC6A6P31641 620 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 MASP1P48740 699 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RPA4Q13156 261 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ILKQ13418 452 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ABHD13Q7L211 337 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 NRMQ8IXM6 262 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 KLHDC8AQ8IYD2 350 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 KCT2Q8NC54 265 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 OR5D16Q8NGK9 328 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 OR51A7Q8NH64 312 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 CHTF18Q8WVB6 975 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 JPH3Q8WXH2 748 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 FOXJ1Q92949 421 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 PRRC1Q96M27 445 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 OR4K3Q96R72 315 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RHNO1Q9BSD3 238 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RSPH9Q9H1X1 276 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 DPEP2Q9H4A9 486 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TMEM38AQ9H6F2 299 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RANBP3Q9H6Z4 567 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TTC3P53804 2025 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 A0A075B6Q4 140 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 UNC119BA6NIH7 251 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SLC22A31A6NKX4 558 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TRIM64CA6NLI5 447 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 FZD6O60353 706 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ADAM23O75077 832 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SLCO2B1O94956 709 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 F11P03951 625 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TACSTD2P09758 323 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 BMP1P13497 986 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TGFBR1P36897 503 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RAB28P51157 221 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ARFIP1P53367 373 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 NUBP1P53384 320 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SNRPD2P62316 118 aaKnown RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 MAP4K2Q12851 820 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SOWAHCQ53LP3 525 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ATAD3CQ5T2N8 411 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ENPP7Q6UWV6 458 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF767PQ75MW2 155 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 CALHM3Q86XJ0 350 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 LAX1Q8IWV1 398 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 MSRB3Q8IXL7 192 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ELMOD2Q8IZ81 293 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 LMNTD1Q8N9Z9 388 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 OR56A3Q8NH54 315 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 LILRB4Q8NHJ6 448 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 C15orf40Q8WUR7 153 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SLC38A5Q8WUX1 472 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 DEDD2Q8WXF8 326 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 DTD2Q96FN9 168 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SNX18Q96RF0 628 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TREX2Q9BQ50 279 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SAP130Q9H0E3 1048 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RLIMQ9NVW2 624 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 IL20RAQ9UHF4 553 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 UGT2A1Q9Y4X1 527 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 FER1L6Q2WGJ9 1857 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TRBV5-4A0A0C4DH59 114 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 C12orf71A8MTZ7 269 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 GFYI3L273 518 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 CASC3O15234 703 aaKnown RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 B4GALT3O60512 393 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 PRSS23O95084 383 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 HMGN2P05204 90 aaKnown RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ADRB3P13945 408 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 GNSP15586 552 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SYN1P17600 705 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ACVR1BP36896 505 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RPS5P46782 204 aaKnown RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 KCNJ10P78508 379 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ID2Q02363 134 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TAP2Q03519 686 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SYPL1Q16563 259 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RPL13AP3Q6NVV1 102 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 PLBD1Q6P4A8 553 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms