RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 WDR88Q6ZMY6 472 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ADCK1Q86TW2 530 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 METTL4Q8N3J2 472 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ZNF248Q8NDW4 579 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ANKRD20A12PQ8NF67 263 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ATP8B4Q8TF62 1192 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TMEM45BQ96B21 275 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 LINC00479Q96M42 142 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 WRAP53Q9BUR4 548 aaKnown RBP4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CXXC4Q9H2H0 198 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 IL1RAPQ9NPH3 570 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 HPS4Q9NQG7 708 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ERVK-18Q9QC07 812 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TUBGCP4Q9UGJ1 667 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CIDEBQ9UHD4 219 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CLCA3PQ9Y6N3 262 aa4.3□□□□□ -1.72
PTP4A1P3-201ENST00000433661 USP6P35125 1406 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 NCAPD2Q15021 1401 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 METP08581 1390 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CCNB3Q8WWL7 1395 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TCF20Q9UGU0 1960 aaKnown RBP4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 LRRC37A3O60309 1634 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TRPM1Q7Z4N2 1603 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 NCOR1O75376 2440 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 SH3PXD2BA1X283 911 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TMEM89A2RUT3 159 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 K7EQG2 157 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ZG16O60844 167 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 HILS1P60008 231 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 SRPXP78539 464 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 SLC17A1Q14916 467 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 P2RY14Q15391 338 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 KNOP1Q1ED39 458 aaKnown RBP4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 MS4A18Q3C1V0 323 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 DDI2Q5TDH0 399 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ZNF730Q6ZMV8 503 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 Q71RC1 249 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CATSPER4Q7RTX7 472 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 MRPL24Q96A35 216 aaKnown RBP4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CCDC51Q96ER9 411 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ATXN7L3BQ96GX2 97 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ACCSQ96QU6 501 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 RAB11FIP5Q9BXF6 653 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 KRT23Q9C075 422 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ECT2Q9H8V3 914 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 THAP10Q9P2Z0 257 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 LHX3Q9UBR4 397 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 SPATA2Q9UM82 520 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ENTPD4Q9Y227 616 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TRANK1O15050 2925 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 COL18A1P39060 1754 aa4.29□□□□□ -1.72
PTP4A1P3-201ENST00000433661 BRCA1P38398 1863 aaKnown RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 KANK1Q14678 1352 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 N4BP2Q86UW6 1770 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ATRXP46100 2492 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 IGHV3OR16-10A0A075B7F0 116 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 A0A0A6YYD4 124 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 LOC390937A0A1W2PQ73 354 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ARHGEF33A8MVX0 844 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 E9PMD0 336 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 SGK494L7N484 410 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 FBP2O00757 339 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TXNL1O43396 289 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CSO75390 466 aaKnown RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 GMNNO75496 209 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 B3GALNT1O75752 331 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 STAM2O75886 525 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 REC8O95072 547 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 NDUFA7O95182 113 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 LYNP07948 512 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TSPY4P0CV99 314 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 TSPY10P0CW01 314 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 FOSL2P15408 326 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 AOC1P19801 751 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 PPP2R1AP30153 589 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ACADSBP45954 432 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 SLC1A6P48664 564 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 IRX1P78414 480 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 FKBP3Q00688 224 aaKnown RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 FUT7Q11130 342 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 KLF5Q13887 457 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ZNF146Q15072 292 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 GFI1BQ5VTD9 330 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 LIPJQ5W064 366 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CWC27Q6UX04 472 aaKnown RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 PAQR9Q6ZVX9 377 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ASRGL1Q7L266 308 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ADGRD2Q7Z7M1 963 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 VPS36Q86VN1 386 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 RANBP3LQ86VV4 465 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 LRRC17Q8N6Y2 441 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CHPT1Q8WUD6 406 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 NCLNQ969V3 563 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 NABP1Q96AH0 204 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 CXorf58Q96LI9 332 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 SYT11Q9BT88 431 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 KCNK13Q9HB14 408 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 COPS7AQ9UBW8 275 aa4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 ZNF490Q9ULM2 529 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1P3-201ENST00000433661 NHSQ6T4R5 1651 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms