RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 H0Y3Z8 333 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 STX16-NPEPL1H3BU86 382 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 STX16O14662 325 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 SNPHO15079 494 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 PDYNP01213 254 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 RBP1P09455 135 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 CYP4B1P13584 511 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 S1PR1P21453 382 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 CTSSP25774 331 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 SOX18P35713 384 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 MRPS35P82673 323 aaKnown RBP12.68□□□□□ -0.38
SEC13-211ENST00000431352 DUSP2Q05923 314 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 SF3B4Q15427 424 aaKnown RBP eCLIP12.68□□□□□ -0.381e-7■■□□□ 13.7
SEC13-211ENST00000431352 PRICKLE4Q2TBC4 344 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 FBXL19-AS1Q494R0 122 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 SLC48A1Q6P1K1 146 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 LETMD1Q6P1Q0 360 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 METTL2BQ6P1Q9 378 aaKnown RBP12.68□□□□□ -0.38
SEC13-211ENST00000431352 PAMR1Q6UXH9 720 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 C17orf47Q8NEP4 570 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 OR52R1Q8NGF1 315 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 OR14L1PQ8NHC6 308 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 SELENOMQ8WWX9 145 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 HGDQ93099 445 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 NTMT1Q9BV86 223 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 ZDHHC18Q9NUE0 388 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 FOXD3Q9UJU5 478 aaPredicted RBP12.68□□□□□ -0.38
SEC13-211ENST00000431352 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 EDARQ9UNE0 448 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 PLLPQ9Y342 182 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 IKBKGQ9Y6K9 419 aa12.68□□□□□ -0.38
SEC13-211ENST00000431352 MED12Q93074 2177 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 C1orf226A1L170 272 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 FAM221AA4D161 298 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 MBD3L4A6NDZ8 208 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 MBD3L3A6NE82 208 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 PRAMEF25A6NGN4 478 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 MBD3L5A6NJ08 208 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 PPP6CO00743 305 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 ICOSLGO75144 302 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 UGT2B11O75310 529 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 GUCY1B2O75343 617 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 NME6O75414 186 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 ESRRBO95718 433 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 ATP1B1P05026 303 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 TMIGD3P0DMS9 266 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 PCSK2P16519 638 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 CSNK2A2P19784 350 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 OPRM1P35372 400 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 SLCO1A2P46721 670 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 CPA2P48052 419 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 CDH13P55290 713 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 MGAT2Q10469 447 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 GALNT1Q10472 559 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 FOXF2Q12947 444 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 GGTA1PQ4G0N0 100 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 TCHHL1Q5QJ38 904 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 LUZP2Q86TE4 346 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 KIF18BQ86Y91 864 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 C1orf52Q8N6N3 182 aaKnown RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 MBD3L2Q8NHZ7 208 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 LCORQ96JN0 433 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 PAFAH2Q99487 392 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 TUBA1CQ9BQE3 449 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 YIPF4Q9BSR8 244 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 LRRC1Q9BTT6 524 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 GSX1Q9H4S2 264 aaPredicted RBP12.67□□□□□ -0.38
SEC13-211ENST00000431352 CES1P1Q9UKY3 287 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 TMCO1Q9UM00 188 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 CFL2Q9Y281 166 aa12.67□□□□□ -0.38
SEC13-211ENST00000431352 POC1B-GALNT4F8VUJ3 575 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 ERN1O75460 977 aaKnown RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 CBX7O95931 251 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 ACTL6AO96019 429 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 OTCP00480 354 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 RAF1P04049 648 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 RPS17P08708 135 aaKnown RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 EPXP11678 715 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 PTGDSP41222 190 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 MAGEA12P43365 314 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 CKAP4Q07065 602 aaKnown RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 KEAP1Q14145 624 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 TRMT12Q53H54 448 aaKnown RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 TEX35Q5T0J7 233 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 C10orf62Q5T681 223 aaPredicted RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 SLC30A6Q6NXT4 461 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 TAOK1Q7L7X3 1001 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 NUP54Q7Z3B4 507 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 ZNF572Q7Z3I7 529 aaPredicted RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 GCNT2Q8N0V5 402 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 TRPC4APQ8TEL6 797 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 ZNF483Q8TF39 744 aaPredicted RBP12.66□□□□□ -0.38
SEC13-211ENST00000431352 SLC44A1Q8WWI5 657 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 TMBIM1Q969X1 311 aa12.66□□□□□ -0.38
SEC13-211ENST00000431352 TM4SF18Q96CE8 201 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms