RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TCTN3Q6NUS6 607 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 MFSD12Q6NUT3 480 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 OGFOD3Q6PK18 319 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 SLC25A45Q8N413 288 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 MAFAQ8NHW3 353 aaPredicted RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 BBS10Q8TAM1 723 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 ADAMTS15Q8TE58 950 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 PHF10Q8WUB8 498 aaKnown RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 CDS1Q92903 461 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 UBE2FQ969M7 185 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 TCTN2Q96GX1 697 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 MS4A4EQ96PG1 132 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 UCK1Q9HA47 277 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 GMPPBQ9Y5P6 360 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 TRBV4-1A0A0J9YWV2 114 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 OR2W5A6NFC9 320 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 UGT2B11O75310 529 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ZIC2O95409 532 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 NT5EP21589 574 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 TUBA4AP68366 448 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 PRTGQ2VWP7 1150 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 AMZ1Q400G9 498 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ZNF628Q5EBL2 1059 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 C6orf141Q5SZD1 244 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 C16orf62Q7Z3J2 963 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 SAMD14Q8IZD0 417 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 OR2L13Q8N349 312 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 TSC22D3Q99576 134 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ARPC5LQ9BPX5 153 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 SLC38A1Q9H2H9 487 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ADAP2Q9NPF8 381 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 SMIM31A0A1B0GVY4 71 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 H3BSA7 217 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 FCMRO60667 390 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 BMP10O95393 424 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 GPR75O95800 540 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 CT62P0C5K7 136 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ZNF24P17028 368 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 CRHBPP24387 322 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 LIMS1P48059 325 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 DHPSP49366 369 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 PDX1P52945 283 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 PIGFQ07326 219 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ERV3-1Q14264 604 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 EXOSC7Q15024 291 aaKnown RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 FGD3Q5JSP0 725 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 MFSD4BQ5TF39 518 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 DGAT2L6Q6ZPD8 337 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 CCDC71Q8IV32 467 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 TAGAPQ8N103 731 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 Q8N9G6 341 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 GTPBP3Q969Y2 492 aaKnown RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ANKRD9Q96BM1 317 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 ALPK1Q96QP1 1244 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 NMNAT1Q9HAN9 279 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-203ENST00000431146 BCL2L10Q9HD36 194 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 CTPS2Q9NRF8 586 aa15.61■□□□□ 0.09
USHBP1-203ENST00000431146 FOXS1O43638 330 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 TPST2O60704 377 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 CDH2P19022 906 aaPredicted RBP15.6■□□□□ 0.09
USHBP1-203ENST00000431146 ALDH3B2P48448 385 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 SEPHS1P49903 392 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 RAB38P57729 211 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 RPP38P78345 283 aaKnown RBP15.6■□□□□ 0.09
USHBP1-203ENST00000431146 PIN1Q13526 163 aaPredicted RBP15.6■□□□□ 0.09
USHBP1-203ENST00000431146 SNAP47Q5SQN1 464 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 MLIPQ5VWP3 458 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 TSPYL5Q86VY4 417 aaPredicted RBP15.6■□□□□ 0.09
USHBP1-203ENST00000431146 VRK2Q86Y07 508 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 SLC35F3Q8IY50 421 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 RASSF5Q8WWW0 418 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 PEX11GQ96HA9 241 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 AHCYL2Q96HN2 611 aaKnown RBP15.6■□□□□ 0.09
USHBP1-203ENST00000431146 RBM38Q9H0Z9 239 aaKnown RBP15.6■□□□□ 0.09
USHBP1-203ENST00000431146 FSCN3Q9NQT6 498 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 RASSF1Q9NS23 344 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 DNAAF2Q9NVR5 837 aaKnown RBP15.6■□□□□ 0.09
USHBP1-203ENST00000431146 KCND3Q9UK17 655 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 MKLN1Q9UL63 735 aa15.6■□□□□ 0.09
USHBP1-203ENST00000431146 A0A0G2JPF8 293 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 TLCD2A6NGC4 264 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 TRIM64CA6NLI5 447 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 HNRNPCL2B2RXH8 293 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 HNRNPCL3B7ZW38 293 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 FRS3O43559 492 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 XPNPEP2O43895 674 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 SRPX2O60687 465 aaPredicted RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 CCNB2O95067 398 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 HNRNPCL4P0DMR1 293 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 FMO3P31513 532 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 GABRA4P48169 554 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 HLCSP50747 726 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 CDK5R2Q13319 367 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 DUSP5Q16690 384 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 CCNJQ5T5M9 372 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 ATAD3BQ5T9A4 648 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 LAIR1Q6GTX8 287 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 BPIFB6Q8NFQ5 453 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 OR6T1Q8NGN1 323 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 HDAC2Q92769 488 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms