RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ZNF615Q8N8J6 731 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 CDRT4Q8N9R6 151 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 C16orf52Q8NHV5 167 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 DOK4Q8TEW6 326 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 SNRNP27Q8WVK2 155 aaKnown RBP10.22□□□□□ -0.77
CHD4-202ENST00000430771 JADE3Q92613 823 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 RCN3Q96D15 328 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 NEURL3Q96EH8 262 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 NPAS2Q99743 824 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 ITPAQ9BY32 194 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 WWTR1Q9GZV5 400 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 PAIP1Q9H074 479 aaKnown RBP10.22□□□□□ -0.77
CHD4-202ENST00000430771 FOLH1BQ9HBA9 442 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 EQTNQ9NQ60 294 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 NDE1Q9NXR1 346 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 ZNF223Q9UK11 482 aaPredicted RBP10.22□□□□□ -0.77
CHD4-202ENST00000430771 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
CHD4-202ENST00000430771 FAF1Q9UNN5 650 aaPredicted RBP10.22□□□□□ -0.77
CHD4-202ENST00000430771 CPAMD8Q8IZJ3 1885 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 FRG2CA6NGY1 282 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 FBP2O00757 339 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 ACOX3O15254 700 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 SOX30O94993 753 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 AGR2O95994 175 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 ALPPP05187 535 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 GSNP06396 782 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 SOX18P35713 384 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 MAGEA8P43361 318 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 EMDP50402 254 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 NRG3P56975 720 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 SOX8P57073 446 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 GABPB1Q06547 395 aaPredicted RBP10.21□□□□□ -0.77
CHD4-202ENST00000430771 Q0VFX4 171 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 FADDQ13158 208 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 DUSP8Q13202 625 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 ART3Q13508 389 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 GTDC1Q4AE62 458 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 CRB2Q5IJ48 1285 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 MFSD12Q6NUT3 480 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 CDC73Q6P1J9 531 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 BORAQ6PGQ7 559 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 HACD2Q6Y1H2 254 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 TAGAPQ8N103 731 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 KIF2BQ8N4N8 673 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 SLC22A8Q8TCC7 542 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 BRIX1Q8TDN6 353 aaKnown RBP10.21□□□□□ -0.77
CHD4-202ENST00000430771 ZFP90Q8TF47 636 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 APOBEC4Q8WW27 367 aaKnown RBP10.21□□□□□ -0.77
CHD4-202ENST00000430771 GIMAP5Q96F15 307 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 VSTM2LQ96N03 204 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 BTBD9Q96Q07 612 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 STACQ99469 402 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 CGREF1Q99674 301 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 LMF2Q9BU23 707 aaKnown RBP10.21□□□□□ -0.77
CHD4-202ENST00000430771 ACTRT3Q9BYD9 372 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 TRIM4Q9C037 500 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 EFCAB1Q9HAE3 211 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 TPT1P8Q9HAU6 139 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 Q9N2J8 555 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 GPR83Q9NYM4 423 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 PCDHB14Q9Y5E9 798 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 KCNMB2Q9Y691 235 aa10.21□□□□□ -0.77
CHD4-202ENST00000430771 ACACBO00763 2458 aa10.21□□□□□ -0.78
CHD4-202ENST00000430771 TRBV5-3A0A0A0MS03 114 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 DUXAA6NLW8 204 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 EVPLLA8MZ36 301 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 AIM2O14862 343 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 ASNA1O43681 348 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 CBX6O95503 412 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 ITGB2P05107 769 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 HMGN2P05204 90 aaKnown RBP10.2□□□□□ -0.78
CHD4-202ENST00000430771 ALOX5P09917 674 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 ESRRAP11474 423 aaPredicted RBP10.2□□□□□ -0.78
CHD4-202ENST00000430771 CD1EP15812 388 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 HOXB9P17482 250 aaPredicted RBP10.2□□□□□ -0.78
CHD4-202ENST00000430771 PTPN6P29350 595 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 CASRP41180 1078 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 CPA2P48052 419 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 TMED10P49755 219 aaKnown RBP10.2□□□□□ -0.78
CHD4-202ENST00000430771 MXRA7P84157 204 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 MEP1AQ16819 746 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 ABHD17BQ5VST6 288 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 AGAP7PQ5VUJ5 663 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 C6orf120Q7Z4R8 191 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 RNF130Q86XS8 419 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 DND1Q8IYX4 353 aaKnown RBP10.2□□□□□ -0.78
CHD4-202ENST00000430771 SIRT6Q8N6T7 355 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 COX18Q8N8Q8 333 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 ZNF441Q8N8Z8 693 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 OR8J3Q8NGG0 315 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 OR52N2Q8NGI0 321 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 FBXO30Q8TB52 745 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 MIPOL1Q8TD10 442 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 ADAMTS15Q8TE58 950 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 SLC9A6Q92581 669 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 TP53INP1Q96A56 240 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 LRRC58Q96CX6 371 aa10.2□□□□□ -0.78
CHD4-202ENST00000430771 HSPBAP1Q96EW2 488 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms