RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 HOXD4P09016 255 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-202ENST00000430200 PYGBP11216 843 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 MAP4K2Q12851 820 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 BIKQ13323 160 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 SLC29A2Q14542 456 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 GLE1Q53GS7 698 aaKnown RBP10.76□□□□□ -0.69
HDAC4-202ENST00000430200 WIPI1Q5MNZ9 446 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-202ENST00000430200 GPRIN3Q6ZVF9 776 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 ACAD11Q709F0 780 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 PAGE2Q7Z2X7 111 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 DND1Q8IYX4 353 aaKnown RBP10.76□□□□□ -0.69
HDAC4-202ENST00000430200 TAGAPQ8N103 731 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 C17orf47Q8NEP4 570 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 MYRIPQ8NFW9 859 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 OR10Q1Q8NGQ4 319 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 KAT2AQ92830 837 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 SARAFQ96BY9 339 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 L3HYPDHQ96EM0 354 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 SH3GL2Q99962 352 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 UGT2B28Q9BY64 529 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 PRDM14Q9GZV8 571 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 RUBCNLQ9H714 662 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 EXO5Q9H790 373 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 KCNJ16Q9NPI9 418 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 ALKBH4Q9NXW9 302 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 TBK1Q9UHD2 729 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 EXO1Q9UQ84 846 aaKnown RBP10.76□□□□□ -0.69
HDAC4-202ENST00000430200 DLGAP4Q9Y2H0 992 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 PTGDR2Q9Y5Y4 395 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 ACANP16112 2415 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 ATP5F1P24539 256 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 TIA1P31483 386 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 SLCO1A2P46721 670 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 ZFP36L2P47974 494 aaKnown RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 ZNF136P52737 540 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 PRKAA2P54646 552 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 NAGLUP54802 743 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 CSTF3Q12996 717 aaKnown RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 RASA2Q15283 850 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 C10orf62Q5T681 223 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 WLSQ5T9L3 541 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 RIPPLY2Q5TAB7 128 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 ANGPTL8Q6UXH0 198 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 WDR53Q7Z5U6 358 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 YRDCQ86U90 279 aaKnown RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 WDSUB1Q8N9V3 476 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 MNS1Q8NEH6 495 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 OR7G2Q8NG99 324 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 OR7G1Q8NGA0 311 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 RNF138Q8WVD3 245 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 EXOSC8Q96B26 276 aaKnown RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 TMEM41AQ96HV5 264 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 VSTM2LQ96N03 204 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 TIMP4Q99727 224 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 G6PC3Q9BUM1 346 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 SERHLQ9NQF3 203 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 QPCTLQ9NXS2 382 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 FLRT3Q9NZU0 649 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 PSMC3IPQ9P2W1 217 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-202ENST00000430200 VPS29Q9UBQ0 182 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 BCAP29Q9UHQ4 241 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 MCM8Q9UJA3 840 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 UTS2RQ9UKP6 389 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 SNX6Q9UNH7 406 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 MAPRE3Q9UPY8 281 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 ABCA4P78363 2273 aa10.75□□□□□ -0.69
HDAC4-202ENST00000430200 RAI1Q7Z5J4 1906 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 GOLGA6L10A6NI86 522 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 SNPHO15079 494 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 PROCP04070 461 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 CT45A8P0DMV1 189 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 CT45A9P0DMV2 189 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 BMP7P18075 431 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 CSNK2A2P19784 350 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 IMPDH1P20839 514 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 CEACAM8P31997 349 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 PLCXD2Q0VAA5 305 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 LCP2Q13094 533 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 CEBPEQ15744 281 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 CT45A2Q5DJT8 189 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 TBCELQ5QJ74 424 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 HLA-DQA1Q5Y7H0 255 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 TIGD3Q6B0B8 471 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 VASNQ6EMK4 673 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 TRMT10CQ7L0Y3 403 aaKnown RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 CCDC116Q8IYX3 515 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 C7orf57Q8NEG2 295 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 FAM83FQ8NEG4 500 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 OR4N2Q8NGD1 307 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 ZNF675Q8TD23 568 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 EPS8L3Q8TE67 593 aaKnown RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 C16orf78Q8WTQ4 265 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 TMBIM1Q969X1 311 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 WDYHV1Q96HA8 205 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 LCORQ96JN0 433 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 BTBD9Q96Q07 612 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 SECISBP2Q96T21 854 aaKnown RBP10.74□□□□□ -0.69
HDAC4-202ENST00000430200 OSBPL11Q9BXB4 747 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms