RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	EMCN	Q9ULC0	261 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	STK38L	Q9Y2H1	464 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	SNX4	O95219	450 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZWINT	O95229	277 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	GLI4	P10075	376 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	PYGB	P11216	843 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	NAGA	P17050	411 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	DEK	P35659	375 aa	Known RBP	16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	PKNOX1	P55347	436 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	MYBPH	Q13203	477 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	WLS	Q5T9L3	541 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	TMEM198	Q66K66	360 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	TMEM81	Q6P7N7	255 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	CLYBL	Q8N0X4	340 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	GBP7	Q8N8V2	638 aa	Predicted RBP	16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	SIMC1	Q8NDZ2	872 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	CHDH	Q8NE62	594 aa	Predicted RBP	16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	KLHL29	Q96CT2	875 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZNF597	Q96LX8	424 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	RILP	Q96NA2	401 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	ITPA	Q9BY32	194 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	BRINP2	Q9C0B6	783 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	SLC6A15	Q9H2J7	730 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	B4GALT7	Q9UBV7	327 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	TBK1	Q9UHD2	729 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738	CFL2	Q9Y281	166 aa		16.24	■□□□□ 0.19
MRPL28-203	ENST00000429738		G3V2L1	256 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	ESRRB	O95718	433 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	ENO1	P06733	434 aa	Known RBP	16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	ABCB1	P08183	1280 aa	Predicted RBP	16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	GABRA1	P14867	456 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	HMOX2	P30519	316 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	CASP3	P42574	277 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	EXOSC7	Q15024	291 aa	Known RBP	16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	TRMT12	Q53H54	448 aa	Known RBP	16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	SPIN4	Q56A73	249 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	FAM180B	Q6P0A1	224 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	GALNT18	Q6P9A2	607 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	GSPT2	Q8IYD1	628 aa	Known RBP	16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	PRR22	Q8IZ63	422 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	ADCY4	Q8NFM4	1077 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZNF675	Q8TD23	568 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	NINJ1	Q92982	152 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	HSPBAP1	Q96EW2	488 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	APIP	Q96GX9	242 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	JSRP1	Q96MG2	331 aa	Predicted RBP	16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	SIRT5	Q9NXA8	310 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	UTS2R	Q9UKP6	389 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	DLGAP4	Q9Y2H0	992 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738	PLLP	Q9Y342	182 aa		16.23	■□□□□ 0.19
MRPL28-203	ENST00000429738		A0A0G2JNJ9	132 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738		A0A1W2PPM1	405 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	UBFD1	O14562	309 aa	Known RBP	16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	PCDH7	O60245	1069 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	PPM1B	O75688	479 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	HPN	P05981	417 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	IL3	P08700	152 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	DRD2	P14416	443 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	GDF1	P27539	372 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	ADH7	P40394	386 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	ALDH9A1	P49189	494 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	EMD	P50402	254 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	RPP38	P78345	283 aa	Known RBP	16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	HMGCS1	Q01581	520 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	LTB4R	Q15722	352 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	CEBPE	Q15744	281 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZNF628	Q5EBL2	1059 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	C1orf185	Q5T7R7	199 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	OR52R1	Q8NGF1	315 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	HGD	Q93099	445 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	CCDC126	Q96EE4	140 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	TMEM41A	Q96HV5	264 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	LCOR	Q96JN0	433 aa	Predicted RBP	16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	KCNA7	Q96RP8	456 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	EXO5	Q9H790	373 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	DNAJB12	Q9NXW2	375 aa	Known RBP	16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738		Q9UFV3	132 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	BCAP29	Q9UHQ4	241 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	TIMM22	Q9Y584	194 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZNF780B	Q9Y6R6	833 aa		16.22	■□□□□ 0.19
MRPL28-203	ENST00000429738	T	O15178	435 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	ACOX3	O15254	700 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	GLRA3	O75311	464 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	SHBG	P04278	402 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	PCSK2	P16519	638 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	KLK2	P20151	261 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	TIA1	P31483	386 aa	Known RBP eCLIP	16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	PTGDS	P41222	190 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZFP36L2	P47974	494 aa	Known RBP	16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	CDK9	P50750	372 aa	Known RBP	16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	FOXA1	P55317	472 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	DCAF7	P61962	342 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	MRPS35	P82673	323 aa	Known RBP	16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	CRYZ	Q08257	329 aa	Known RBP	16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	NNAT	Q16517	81 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZYG11A	Q6WRX3	759 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	PACS2	Q86VP3	889 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	TDRP	Q86YL5	185 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	ULK2	Q8IYT8	1036 aa		16.21	■□□□□ 0.19
MRPL28-203	ENST00000429738	C16orf78	Q8WTQ4	265 aa		16.21	■□□□□ 0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms