RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TDGF1P13385 188 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 EPCAMP16422 314 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CPEP16870 476 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GJA1P17302 382 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 MYL12AP19105 171 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 BSGP35613 385 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 DDOSTP39656 456 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CRYBB2P43320 205 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 KHKP50053 298 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SMSP52788 366 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 LIM2P55344 173 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 REEP5Q00765 189 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CD300CQ08708 224 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RAB40BQ12829 278 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SEC23BQ15437 767 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF528Q3MIS6 628 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM35AQ53FP2 167 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ARMC4Q5T2S8 1044 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RSBN1Q5VWQ0 802 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM215Q68D42 235 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RAET1GQ6H3X3 334 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TCTN3Q6NUS6 607 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PGBD2Q6P3X8 592 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 METAP1DQ6UB28 335 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM64Q6YI46 380 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FAM83HQ6ZRV2 1179 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 MMAAQ8IVH4 418 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 OR8H2Q8N162 312 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 LILRA3Q8N6C8 439 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 HORMAD2Q8N7B1 307 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 MRPL43Q8N983 215 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 OR5AK3PQ8NH89 298 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SFXN5Q8TD22 340 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CYB5D2Q8WUJ1 264 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 OR8D1Q8WZ84 308 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RAB7BQ96AH8 199 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FNDC11Q9BVV2 318 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FOXQ1Q9C009 403 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 POLR2J2Q9GZM3 115 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 OR2AG1Q9H205 316 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ANKRD19PQ9H560 264 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TRIM45Q9H8W5 580 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 NEK6Q9HC98 313 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FGF20Q9NP95 211 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 EXOSC4Q9NPD3 245 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SEMA3GQ9NS98 782 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SEC14L3Q9UDX4 400 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CCL26Q9Y258 94 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SLC27A6Q9Y2P4 619 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GSTK1Q9Y2Q3 226 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 EXOSC1Q9Y3B2 195 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 A0A0G2JPF8 293 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 EDDM13A0A1B0GTR0 161 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TMEM129A0AVI4 362 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 HMX3A6NHT5 357 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SHISA7A6NL88 538 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 HNRNPCL2B2RXH8 293 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 GPR89AB7ZAQ6 455 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 HNRNPCL3B7ZW38 293 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SAP18O00422 153 aaKnown RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 KPNA3O00505 521 aaPredicted RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 PLPP1O14494 284 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 CTDSP2O14595 271 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TERTO14746 1132 aaKnown RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 CCL16O15467 120 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 HOXC11O43248 304 aaPredicted RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SLC28A2O43868 658 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TPST2O60704 377 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 NME6O75414 186 aaPredicted RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ZIC2O95409 532 aaPredicted RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ADH1CP00326 375 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SOD1P00441 154 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 GBAP04062 536 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 HNRNPA1P09651 372 aaKnown RBP eCLIP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 CISD3P0C7P0 127 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 C1QTNF9P0C862 333 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 GPR89BP0CG08 455 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SPNP16150 400 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 WEE1P30291 646 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 RPS19P39019 145 aaKnown RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 HTR3AP46098 478 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SLC9A3P48764 834 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 CCT3P49368 545 aaKnown RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 CRISP3P54108 245 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 PSPHP78330 225 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ZNF91Q05481 1191 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TARDBPQ13148 414 aaKnown RBP eCLIP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ASAH1Q13510 395 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TEAD2Q15562 447 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 PLK5Q496M5 336 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ENTPD8Q5MY95 495 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 C1orf94Q6P1W5 598 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ADAMTSL4Q6UY14 1074 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 VN1R5Q7Z5H4 357 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 AMZ2Q86W34 360 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TBC1D19Q8N5T2 526 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms