RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SIRT3Q9NTG7 399 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 B3GNT3Q9Y2A9 372 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 COPG1Q9Y678 874 aaKnown RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 CCDC88CQ9P219 2028 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 FRG2CA6NGY1 282 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 SLC22A2O15244 555 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 OR2J2O76002 312 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 NADKO95544 446 aaPredicted RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 CT45A8P0DMV1 189 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 CT45A9P0DMV2 189 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 TRPC1P48995 793 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 CCT3P49368 545 aaKnown RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 CDK9P50750 372 aaKnown RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 NRG3P56975 720 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 HBA1P69905 142 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 ARG2P78540 354 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 TXNL4AP83876 142 aaKnown RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 HSPB3Q12988 150 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 RCAN2Q14206 197 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 LY6DQ14210 128 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 EXOSC7Q15024 291 aaKnown RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 VPS26BQ4G0F5 336 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 CYP27C1Q4G0S4 372 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 CT45A2Q5DJT8 189 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 EXOSC6Q5RKV6 272 aaKnown RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 FUNDC1Q8IVP5 155 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 TMEM156Q8N614 296 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 CDRT4Q8N9R6 151 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 TEX19Q8NA77 164 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 GOLM1Q8NBJ4 401 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 OR56A1Q8NGH5 318 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 NUDT8Q8WV74 236 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 SECISBP2Q96T21 854 aaKnown RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 LMF2Q9BU23 707 aaKnown RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 RMND5AQ9H871 391 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 ZNF71Q9NQZ8 489 aaPredicted RBP13.83□□□□□ -0.2
GARNL3-204ENST00000429629 ANAPC2Q9UJX6 822 aa13.83□□□□□ -0.2
GARNL3-204ENST00000429629 IGSF10Q6WRI0 2623 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 PIEZO2Q9H5I5 2752 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 WWP2O00308 870 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 CFLARO15519 480 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 MAN1A2O60476 641 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 SNX3O60493 162 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 C6orf47O95873 294 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 KRT16P08779 473 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 FBXO45P0C2W1 286 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 ZCCHC18P0CG32 403 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-204ENST00000429629 DRD4P21917 467 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 TMED10P49755 219 aaKnown RBP13.82□□□□□ -0.2
GARNL3-204ENST00000429629 SEC24CP53992 1094 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 GYS2P54840 703 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 GNGT1P63211 74 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 ZNHIT3Q15649 155 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-204ENST00000429629 ZNF791Q3KP31 576 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-204ENST00000429629 FCRLBQ6BAA4 426 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 PAOXQ6QHF9 649 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 LYPD8Q6UX82 237 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 CPLX4Q7Z7G2 160 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 TRIML2Q8N7C3 387 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 MDS2Q8NDY4 140 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 NUP43Q8NFH3 380 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 DNAJB8Q8NHS0 232 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 DOK4Q8TEW6 326 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 THAP3Q8WTV1 239 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-204ENST00000429629 C10orf82Q8WW14 230 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 ASB15Q8WXK1 588 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 FAM120BQ96EK7 910 aaKnown RBP13.82□□□□□ -0.2
GARNL3-204ENST00000429629 GIMAP5Q96F15 307 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 THOC1Q96FV9 657 aaKnown RBP13.82□□□□□ -0.2
GARNL3-204ENST00000429629 MS4A4EQ96PG1 132 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 TRIM4Q9C037 500 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 FOLH1BQ9HBA9 442 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 SLC52A3Q9NQ40 469 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 LRFN1Q9P244 771 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 ERVK-11Q9UQG0 969 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 NPFFR2Q9Y5X5 522 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 CHD6Q8TD26 2715 aa13.82□□□□□ -0.2
GARNL3-204ENST00000429629 A8MVJ9 347 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 CCDC22O60826 627 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 ABCB7O75027 752 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 ERN1O75460 977 aaKnown RBP13.81□□□□□ -0.2
GARNL3-204ENST00000429629 NEURL1O76050 574 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 NKX2-2O95096 273 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 CD46P15529 392 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 UQCRC2P22695 453 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 PRIM2P49643 509 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 NR0B1P51843 470 aaKnown RBP13.81□□□□□ -0.2
GARNL3-204ENST00000429629 DGKQP52824 942 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 NME5P56597 212 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 KCNK10P57789 538 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 PSG6Q00889 435 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 INAQ16352 499 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 MAPKAPK3Q16644 382 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 SOWAHCQ53LP3 525 aaPredicted RBP13.81□□□□□ -0.2
GARNL3-204ENST00000429629 AP1ARQ63HQ0 302 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 TMEM81Q6P7N7 255 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 SPATA21Q7Z572 469 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms