RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 OR6K3Q8NGY3 331 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR5J2Q8NH18 312 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OSTF1Q92882 214 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMEM143Q96AN5 459 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC25A36Q96CQ1 311 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ASB16Q96NS5 453 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR2A7Q96R45 310 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 CACNG6Q9BXT2 260 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 POLR2J2Q9GZM3 115 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 SPRTNQ9H040 489 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 PRDM13Q9H4Q3 707 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 CDHR5Q9HBB8 845 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 NPDC1Q9NQX5 325 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 FAM86C1Q9NVL1 165 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR6C2Q9NZP2 312 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 PIPOXQ9P0Z9 390 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 TCEAL9Q9UHQ7 104 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 EIF2B4Q9UI10 523 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 GSTK1Q9Y2Q3 226 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 CHD5Q8TDI0 1954 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 KDM4EB2RXH2 506 aaPredicted RBP8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 NPIPB9F8W1W9 429 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 BEST1O76090 585 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 CSF2RAP15509 400 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 PAX1P15863 534 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 FGF9P31371 208 aaPredicted RBP8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 ARL2P36404 184 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 RAB5CP51148 216 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 SUOXP51687 545 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 ADPRHP54922 357 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 POU4F2Q12837 409 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 LCP2Q13094 533 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 MADCAM1Q13477 382 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 DHCR24Q15392 516 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 CDO1Q16878 200 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 DUOXA2Q1HG44 320 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 PLK5Q496M5 336 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 MINDY4Q4G0A6 757 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 SEZ6Q53EL9 994 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 GCNT6Q5T4J0 391 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 FAM219BQ5XKK7 198 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 C22orf42Q6IC83 251 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 RGMBQ6NW40 437 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 BAIAP2L2Q6UXY1 529 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 DEF8Q6ZN54 512 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 Q6ZPB1 254 aaPredicted RBP8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 PID1Q7Z2X4 250 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 RASGEF1AQ8N9B8 481 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF383Q8NA42 475 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 C2CD4AQ8NCU7 369 aaPredicted RBP8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 BEST4Q8NFU0 473 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR52P1PQ8NH57 321 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 RPLP0P6Q8NHW5 317 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 TM9SF4Q92544 642 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF599Q96NL3 588 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 ATF6BQ99941 703 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 SGIP1Q9BQI5 828 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 PORCNQ9H237 461 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 SEMA6CQ9H3T2 930 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 STOX2Q9P2F5 926 aaPredicted RBP8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 DUSP12Q9UNI6 340 aa8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 RUVBL1Q9Y265 456 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-206ENST00000429440 TRAPPC13A5PLN9 417 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 LRIT2A6NDA9 550 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 URADA6NGE7 173 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ITGA10O75578 1167 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 HIST1H2ABP04908 130 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 PFKMP08237 780 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 CPEP16870 476 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 RCC1P18754 421 aaPredicted RBP8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 MSX1P28360 303 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 NOS3P29474 1203 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 CDKN2CP42773 168 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 GZMMP51124 257 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 PKIAP61925 76 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 NHLH2Q02577 135 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 CTBP1Q13363 440 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 USP39Q53GS9 565 aaKnown RBP8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ARSIQ5FYB1 569 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM31Q5JXX7 168 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 C6orf136Q5SQH8 315 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 SCIMPQ6UWF3 145 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 HIST3H2AQ7L7L0 130 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ISCA2Q86U28 154 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF227Q86WZ6 799 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ACOT12Q8WYK0 555 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 HSD17B8Q92506 261 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 HIST1H2ACQ93077 130 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 FUBP3Q96I24 572 aaKnown RBP eCLIP8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ARL6Q9H0F7 186 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 IKZF5Q9H5V7 419 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ISYNA1Q9NPH2 558 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 CLN6Q9NWW5 311 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 UBQLN1Q9UMX0 589 aaKnown RBP8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 GAB2Q9UQC2 676 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 POFUT2Q9Y2G5 429 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms