RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 MC3RP41968 323 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 MRPS21P82921 87 aaKnown RBP12.88□□□□□ -0.35
THBS3-202ENST00000428962 TNFRSF17Q02223 184 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 ADAM15Q13444 863 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 HTR4Q13639 388 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
THBS3-202ENST00000428962 INAQ16352 499 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 ZNF404Q494X3 552 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 KIAA1324Q6UXG2 1013 aaKnown RBP12.88□□□□□ -0.35
THBS3-202ENST00000428962 C16orf62Q7Z3J2 963 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 MFSD4AQ8N468 514 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 OR9A2Q8NGT5 310 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 KLHL6Q8WZ60 621 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 ELP4Q96EB1 424 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 ZNF681Q96N22 645 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 ACTRT3Q9BYD9 372 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 CACYBPQ9HB71 228 aaKnown RBP12.88□□□□□ -0.35
THBS3-202ENST00000428962 ZBTB20Q9HC78 741 aaPredicted RBP12.88□□□□□ -0.35
THBS3-202ENST00000428962 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
THBS3-202ENST00000428962 CLEC1BQ9P126 229 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 KLHL20Q9Y2M5 609 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 IFT52Q9Y366 437 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 PMF1-BGLAPU3KQ54 211 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 CCDC88CQ9P219 2028 aa12.88□□□□□ -0.35
THBS3-202ENST00000428962 GSAPA4D1B5 854 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 LRRC72A6NJI9 287 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 DUXAA6NLW8 204 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 ENTPD6O75354 484 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 ZNF888P0CJ79 500 aaPredicted RBP12.87□□□□□ -0.35
THBS3-202ENST00000428962 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 ALPPL2P10696 532 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 IGFBP4P22692 258 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 AK4P27144 223 aaPredicted RBP12.87□□□□□ -0.35
THBS3-202ENST00000428962 CSTF2P33240 577 aaKnown RBP eCLIP12.87□□□□□ -0.35
THBS3-202ENST00000428962 DUSP2Q05923 314 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 OCLNQ16625 522 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 TRIM16LQ309B1 348 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 ZNF750Q32MQ0 723 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 PRRT3Q5FWE3 981 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 ZNF311Q5JNZ3 666 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 RD3Q7Z3Z2 195 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 VN1R4Q7Z5H5 301 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 LRRC25Q8N386 305 aaPredicted RBP12.87□□□□□ -0.35
THBS3-202ENST00000428962 OR4K5Q8NGD3 323 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 OR6T1Q8NGN1 323 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 OTUB1Q96FW1 271 aaPredicted RBP12.87□□□□□ -0.35
THBS3-202ENST00000428962 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 MS4A4EQ96PG1 132 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 IL4I1Q96RQ9 567 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 DSN1Q9H410 356 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 GIN1Q9NXP7 522 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 KLHL28Q9NXS3 571 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 ZNF624Q9P2J8 865 aaPredicted RBP12.87□□□□□ -0.35
THBS3-202ENST00000428962 SLC6A14Q9UN76 642 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
THBS3-202ENST00000428962 CCRL2O00421 344 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 TNFSF14O43557 240 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 RASGRP1O95267 797 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 EML2O95834 649 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 BMP4P12644 408 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 CPN2P22792 545 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
THBS3-202ENST00000428962 AKT2P31751 481 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 TAS2R41P59536 307 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 YPEL5P62699 121 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 RHAGQ02094 409 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 MED22Q15528 200 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 MFSD4BQ5TF39 518 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 NIPAL1Q6NVV3 410 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 C1orf94Q6P1W5 598 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 TUBA3EQ6PEY2 450 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 IQCHQ86VS3 1027 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 COMTD1Q86VU5 262 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 TRIM48Q8IWZ4 208 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 KCT2Q8NC54 265 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 MGLLQ99685 303 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 ARHGDIGQ99819 225 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 POLDIP3Q9BY77 421 aaKnown RBP12.86□□□□□ -0.35
THBS3-202ENST00000428962 ANKRD19PQ9H560 264 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 EQTNQ9NQ60 294 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 MAN2C1Q9NTJ4 1040 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 IRAK4Q9NWZ3 460 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 DAPK2Q9UIK4 370 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 MYO10Q9HD67 2058 aa12.86□□□□□ -0.35
THBS3-202ENST00000428962 LOC100506127A0A0U1RQW1 187 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 B3GALT2O43825 422 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 HNRNPCP07910 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
THBS3-202ENST00000428962 PRKAR1BP31321 381 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 PTGER1P34995 402 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 MAN2A2P49641 1150 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 SMSP52788 366 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 NCF4Q15080 339 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 ENTPD8Q5MY95 495 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 EOGTQ5NDL2 527 aa12.85□□□□□ -0.35
THBS3-202ENST00000428962 SLC25A30Q5SVS4 291 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms