RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 IDSB3KWA1 339 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 CLDN4O14493 209 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 PLOD3O60568 738 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 TIPRLO75663 272 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 DDAH2O95865 285 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 DLGAP3O95886 979 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 IFNA16P05015 189 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 CHRM4P08173 479 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 TFPTP0C1Z6 253 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 ANPEPP15144 967 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 TNFRSF1BP20333 461 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 KDELR2P33947 212 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 LIMK1P53667 647 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 PCBP3P57721 371 aaKnown RBP8.27□□□□□ -1.09
SMC6-204ENST00000428868 SESN3P58005 492 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 PRR5P85299 388 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 CDK6Q00534 326 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 RHDQ02161 417 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 MAP4K2Q12851 820 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 MYBPC3Q14896 1274 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 DUSP5Q16690 384 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 CYP27C1Q4G0S4 372 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 MLIPQ5VWP3 458 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 MRPL14Q6P1L8 145 aaKnown RBP8.27□□□□□ -1.09
SMC6-204ENST00000428868 ERICH5Q6P6B1 374 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 NPSR1Q6W5P4 371 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 OVCH1Q7RTY7 1134 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 VTCN1Q7Z7D3 282 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 ZAR1Q86SH2 424 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 COMTD1Q86VU5 262 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 PROSER1Q86XN7 944 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 AQP12AQ8IXF9 295 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 SAMD14Q8IZD0 417 aaPredicted RBP8.27□□□□□ -1.09
SMC6-204ENST00000428868 LGI4Q8N135 537 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 C11orf65Q8NCR3 313 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 SLC38A5Q8WUX1 472 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 NRG4Q8WWG1 115 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 XAGE5Q8WWM1 108 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 PIK3R3Q92569 461 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 SLC9A6Q92581 669 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 RIT1Q92963 219 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 STMN2Q93045 179 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 MR1Q95460 341 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 MOAP1Q96BY2 351 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 DUS3LQ96G46 650 aaKnown RBP8.27□□□□□ -1.09
SMC6-204ENST00000428868 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 SEPHS2Q99611 448 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 PKP2Q99959 881 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 SPATA9Q9BWV2 254 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 ACTRT3Q9BYD9 372 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 STRADBQ9C0K7 418 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 TGIF2Q9GZN2 237 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 RAD21L1Q9H4I0 556 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 TMEM38AQ9H6F2 299 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 GORASP2Q9H8Y8 452 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 FOLH1BQ9HBA9 442 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 C3orf14Q9HBI5 128 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 A4GALTQ9NPC4 353 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 DCAF13Q9NV06 445 aaKnown RBP8.27□□□□□ -1.09
SMC6-204ENST00000428868 FBXO34Q9NWN3 711 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 IFT80Q9P2H3 777 aaPredicted RBP8.27□□□□□ -1.09
SMC6-204ENST00000428868 BCAP29Q9UHQ4 241 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 RIMS3Q9UJD0 308 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 NCKAP5O14513 1909 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 MED13Q9UHV7 2174 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 NPIPA5A0A0B4J1W7 369 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 CENPVL1A0A0U1RR11 272 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 PRAMEF25A6NGN4 478 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 NPIPA7E9PJI5 369 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 PLD2O14939 933 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 SLC28A2O43868 658 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 TPST1O60507 370 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 FKBP6O75344 327 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 STK17BO94768 372 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 PRKD3O94806 890 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 BAG2O95816 211 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 HBQ1P09105 142 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 JMJD7P0C870 316 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 NPIPA8P0DM63 369 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 SLC7A1P30825 629 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 MAP3K8P41279 467 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 PRIM2P49643 509 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 EMDP50402 254 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 RNF144AP50876 292 aaPredicted RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 RPS18P62269 152 aaKnown RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 FUT7Q11130 342 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 ZNF155Q12901 538 aaPredicted RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 TARDBPQ13148 414 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMC6-204ENST00000428868 VEZF1Q14119 521 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 SERTAD2Q14140 314 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 NNATQ16517 81 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 GLIPR1L2Q4G1C9 344 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 CYBRD1Q53TN4 286 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 CCNJQ5T5M9 372 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 DCAF12Q5T6F0 453 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 CDC73Q6P1J9 531 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 AAGABQ6PD74 315 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 ZNF517Q6ZMY9 492 aaPredicted RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 CBLL1Q75N03 491 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 ANKRD37Q7Z713 158 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms