RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 SPARTQ8N0X7 666 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 OR4N4Q8N0Y3 316 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 OR7G2Q8NG99 324 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 OR4M2Q8NGB6 313 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GMEB2Q9UKD1 530 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 MUSKO15146 869 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GJB5O95377 273 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ALDOBP05062 364 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 HLA-EP13747 358 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 AMY2BP19961 511 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ADH6P28332 368 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 AGTR1P30556 359 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 DCTP40126 519 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ACTC1P68032 377 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ACTA1P68133 377 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 MFSD13AQ14CX5 517 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 CCDC88AQ3V6T2 1871 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 IER5LQ5T953 404 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GDPD1Q8N9F7 314 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 PROKR1Q8TCW9 393 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 OR8D2Q9GZM6 311 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GM2AP17900 193 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 SNTA1Q13424 505 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 WDR45BQ5MNZ6 344 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GRHL2Q6ISB3 625 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GOLM1Q8NBJ4 401 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 PTERQ96BW5 349 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 XYLT2Q9H1B5 865 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ARMC1Q9NVT9 282 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 MYEF2Q9P2K5 600 aaKnown RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 RPH3AQ9Y2J0 694 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 AMY2AP04746 511 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 UCHL1P09936 223 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ETV3P41162 512 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GPR157Q5UAW9 335 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ANKLE1Q8NAG6 615 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 OR4K17Q8NGC6 315 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 IL17FQ96PD4 163 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 RBP7Q96R05 134 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 MROQ9BYG7 248 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 NAA50Q9GZZ1 169 aaKnown RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 KCNK13Q9HB14 408 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 C1orf196B1AJZ1 125 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 AGPAT2O15120 278 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 CAMLGP49069 296 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ART1P52961 327 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 CRYZQ08257 329 aaKnown RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 FGL1Q08830 312 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 MAP4K2Q12851 820 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 RIN1Q13671 783 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 PLEKHN1Q494U1 663 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 PLEKHS1Q5SXH7 462 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 BAIAP2L2Q6UXY1 529 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ZDHHC14Q8IZN3 488 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 TMEM130Q8N3G9 435 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ARL14Q8N4G2 192 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 KDM1BQ8NB78 822 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 RHBDF1Q96CC6 855 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 NECAB3Q96P71 396 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-204ENST00000428026 F2RL3Q96RI0 385 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 CMKLR1Q99788 373 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 GPRC5BQ9NZH0 403 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 A6NIN4 97 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 COCHO43405 550 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF254O75437 659 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 SOX30O94993 753 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 H2BFMP0C1H6 154 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 C1GALT1C1LP0DN25 315 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF35P13682 527 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 FDXRP22570 491 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 APOFQ13790 326 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 KCNC3Q14003 757 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 DOC2AQ14183 400 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF529Q6P280 563 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 TEX26Q8N6G2 289 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 OR4K14Q8NGD5 310 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 OR52P1PQ8NH57 321 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 FBXL12Q9NXK8 326 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF487B1APH4 448 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 EPOP01588 193 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 TYRP1P17643 537 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 NDUFV2P19404 249 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 SSTR2P30874 369 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ERVPABLB-1P60509 514 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 TUBB3Q13509 450 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 HYAL4Q2M3T9 481 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ESX1Q8N693 406 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 TOR1AIP2Q8NFQ8 470 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 BIN3Q9NQY0 253 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 PGAP2Q9UHJ9 254 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 MYH1P12882 1939 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 NDUFS1P28331 727 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 BLKP51451 505 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 CLDN8P56748 225 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 CNOT9Q92600 299 aaKnown RBP13.79□□□□□ -0.2
PTPRU-204ENST00000428026 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 LMF1Q96S06 567 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms