RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CREBZFQ9NS37 354 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 C2orf42Q9NWW7 574 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 PCDH10Q9P2E7 1040 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 GSTM4Q03013 218 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 ARL14Q8N4G2 192 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 MAL2Q969L2 176 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 SLC41A3Q96GZ6 507 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 GPR83Q9NYM4 423 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 ZNF175Q9Y473 711 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 OTOL1A6NHN0 477 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 PHYHO14832 338 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 GGT1P19440 569 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 THBS2P35442 1172 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 UNC5DQ6UXZ4 953 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 ADAMTS18Q8TE60 1221 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 POTEKPQ9BYX7 375 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 ERVK13-1Q9NX77 482 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 A0A0A6YYH2 397 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 KLHL33A6NCF5 533 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 A6NJ64 397 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 ZNF705EA8MWA4 302 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 E7ESA3 106 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 SHFQ7M4L6 423 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 TMEM135Q86UB9 458 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 LIX1LQ8IVB5 337 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 IL17RCQ8NAC3 791 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 SLC17A9Q9BYT1 436 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 UBE2J1Q9Y385 318 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 SOX30O94993 753 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 PROZP22891 400 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 DEFB110Q30KQ9 67 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 RPS26P11Q5JNZ5 115 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 LARP4Q71RC2 724 aaKnown RBP eCLIP17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 ACBD7Q8N6N7 88 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 NKX2-4Q9H2Z4 354 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 PREBQ9HCU5 417 aa17.08■□□□□ 0.32
ARHGEF28-203ENST00000426542 ART1P52961 327 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 TRMT10AQ8TBZ6 339 aaKnown RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 ASB15Q8WXK1 588 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 LGALS12Q96DT0 336 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 COL1A1P02452 1464 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 FTCDNL1E5RQL4 147 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 S100PP25815 95 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 UBE2NP61088 152 aaKnown RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 EIF4HQ15056 248 aaKnown RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 AWAT2Q6E213 333 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 CRTC1Q6UUV9 634 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 C6orf89Q6UWU4 347 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 MAMDC2Q7Z304 686 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 TMEM151BQ8IW70 566 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 TEX26Q8N6G2 289 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 MAELQ96JY0 434 aaKnown RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 ZNF778Q96MU6 729 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 GPR52Q9Y2T5 361 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 RNF215Q9Y6U7 377 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 COL14A1Q05707 1796 aaKnown RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 CLCN2P51788 898 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 SH3BP2P78314 561 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 STEAP4Q687X5 459 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 SCML4Q8N228 414 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 HERPUD2Q9BSE4 406 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 CWH43Q9H720 699 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 S100A12P80511 92 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 MOGSQ13724 837 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 CEACAM7Q14002 265 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 EEF1A1P5Q5VTE0 462 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 TRIM46Q7Z4K8 759 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 TMEM25Q86YD3 366 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 NPWQ8N729 165 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 BMFQ96LC9 184 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 IL20RAQ9UHF4 553 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 MYADML2A6NDP7 307 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 SEMA4FO95754 770 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 C7P10643 843 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 RAB6CQ53S08 254 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 FCRLBQ6BAA4 426 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 UNQ6126/PRO20091Q6UXV3 157 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 TMEM173Q86WV6 379 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 BEST3Q8N1M1 668 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 OR14L1PQ8NHC6 308 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 RAB6CQ9H0N0 254 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 C8orf33Q9H7E9 229 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 HHATLQ9HCP6 504 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 SUSD2Q9UGT4 822 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 ADAM18Q9Y3Q7 739 aa17.07■□□□□ 0.32
ARHGEF28-203ENST00000426542 HNRNPKP61978 463 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■■■■□ 23.9
ARHGEF28-203ENST00000426542 AAK1Q2M2I8 961 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 HACD2Q6Y1H2 254 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 CHST14Q8NCH0 376 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 APIPQ96GX9 242 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 ACTRT3Q9BYD9 372 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 PHLPP1O60346 1717 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 TNFRSF1BP20333 461 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 SCAPQ12770 1279 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 RBM39Q14498 530 aaKnown RBP17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 TMEM205Q6UW68 189 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 TRAPPC6BQ86SZ2 158 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 PCTPQ9UKL6 214 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms