RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PCYT1AP49585 367 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CLK3P49761 638 aaKnown RBP11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MAPK12P53778 367 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CBLBQ13191 982 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 NAB1Q13506 487 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 EFR3AQ14156 821 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ZKSCAN8Q15776 578 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 BCL2A1Q16548 175 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ACKR1Q16570 336 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PFKFB4Q16877 469 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 C20orf204Q6ZNR8 217 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PLCZ1Q86YW0 608 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SAMD14Q8IZD0 417 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 VWA5B2Q8N398 1253 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ZNF615Q8N8J6 731 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 C9orf106Q8NAJ2 232 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ADIPOR1Q96A54 375 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 OMA1Q96E52 524 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SFXN2Q96NB2 322 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 UCN2Q96RP3 112 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SMR3AQ99954 134 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TUBA1CQ9BQE3 449 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SMYD2Q9NRG4 433 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MAPRE3Q9UPY8 281 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 DLGAP4Q9Y2H0 992 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MRPS18CQ9Y3D5 142 aaKnown RBP11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CSMD2Q7Z408 3487 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FAM187AA6NFU0 413 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 LINC01387J3KSC0 135 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SNPHO15079 494 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SMAD7O15105 426 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PGRMC2O15173 223 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 EEDO75530 441 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRKRAO75569 313 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ESRRBO95718 433 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ALDOAP04075 364 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 KLK1P06870 262 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 POU2F1P14859 743 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 IL12BP29460 328 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SRD5A2P31213 254 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PPICP45877 212 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CCNG1P51959 295 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 RPS3AP61247 264 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MAP4K2Q12851 820 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FASTKD3Q14CZ7 662 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ERCC6LQ2NKX8 1250 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 BICRALQ6AI39 1079 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CNEP1R1Q8N9A8 125 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 NXNL1Q96CM4 212 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PIK3IP1Q96FE7 263 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 Q96MF0 132 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ATOH8Q96SQ7 321 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MCMBPQ9BTE3 642 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 LRRC1Q9BTT6 524 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 NXF5Q9H1B4 397 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ELOVL6Q9H5J4 265 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 UBTD1Q9HAC8 227 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SERHLQ9NQF3 203 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GIMAP4Q9NUV9 329 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TRMT1Q9NXH9 659 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 WHRNQ9P202 907 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 UTP11Q9Y3A2 253 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SPG11Q96JI7 2443 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ABCA2Q9BZC7 2435 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CELSR1Q9NYQ6 3014 aa11.16□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TCRBV9S1A1TA0A576 114 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRAMEF25A6NGN4 478 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FAM159BA6NKW6 160 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 C16orf97H3BN30 126 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 H7C1Q1 480 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TMPRSS11DO60235 418 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TMCC2O75069 709 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SMIM24O75264 130 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 WISP3O95389 354 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GBAP04062 536 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 RBP1P09455 135 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GPX3P22352 226 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PCSK6P29122 969 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TYK2P29597 1187 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CD79BP40259 229 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 NEK2P51955 445 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GNG11P61952 73 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PLEKHM3Q6ZWE6 761 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MILR1Q7Z6M3 343 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 YTHDF3Q7Z739 585 aaKnown RBP11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 L3MBTL4Q8NA19 623 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 OR4K17Q8NGC6 315 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SLC44A1Q8WWI5 657 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PGM2Q96G03 612 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 COL21A1Q96P44 957 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ERP44Q9BS26 406 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRRG4Q9BZD6 226 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 OR2B2Q9GZK3 357 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 STMN4Q9H169 189 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CXorf56Q9H5V9 222 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PTGES2Q9H7Z7 377 aa11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CPSF2Q9P2I0 782 aaKnown RBP11.15□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MRTO4Q9UKD2 239 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms