RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 TOE1Q96GM8 510 aaKnown RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 SLC35G5Q96KT7 338 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 TEFMQ96QE5 360 aaKnown RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 KCNS3Q9BQ31 491 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 DPH7Q9BTV6 452 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 GPR174Q9BXC1 333 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 C1QTNF2Q9BXJ5 285 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 C6orf106Q9H6K1 298 aaPredicted RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 FBRSQ9HAH7 460 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ANKHQ9HCJ1 492 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 WASH6PQ9NQA3 447 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 CLEC2DQ9UHP7 191 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 PLEKHM1Q9Y4G2 1056 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 GPSM3Q9Y4H4 160 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 NOX1Q9Y5S8 564 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 GPC6Q9Y625 555 aaPredicted RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 NCOR1O75376 2440 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 A0A1W2PPV9 198 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 ARHGAP33O14559 1287 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 SEMA4FO95754 770 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 HOXB3P14651 431 aaPredicted RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 PCBP4P57723 403 aaKnown RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 ARHGAP19Q14CB8 494 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 ZNF750Q32MQ0 723 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 STEAP3Q658P3 488 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 COMTD1Q86VU5 262 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 MEX3DQ86XN8 651 aaKnown RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 LYSMD2Q8IV50 215 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 CYP4Z2PQ8N1L4 340 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 TCEANCQ8N8B7 351 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 MINDY2Q8NBR6 621 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 KLHL25Q9H0H3 589 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 PHPT1Q9NRX4 125 aaPredicted RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 TVP23BQ9NYZ1 205 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 SCHIP1Q9P0W5 487 aaPredicted RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 SCML1Q9UN30 329 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 PCDHGA3Q9Y5H0 932 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 SH3D21A4FU49 640 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 LRRC72A6NJI9 287 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 OR52A4PA6NMU1 304 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 NME6O75414 186 aaPredicted RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 BUD31P41223 144 aaPredicted RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 CSNK1G2P78368 415 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.85e-6■■■□□ 16.8
CUX1-205ENST00000425244 TEKQ02763 1124 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 USP30Q70CQ3 517 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 C9orf43Q8TAL5 461 aaPredicted RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 SLC7A13Q8TCU3 470 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 ZNF354BQ96LW1 612 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 BBS4Q96RK4 519 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 INSM2Q96T92 566 aaPredicted RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 CNPPD1Q9BV87 410 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 C1QTNF7Q9BXJ2 289 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 CDCA4Q9BXL8 241 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 PCBD2Q9H0N5 130 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 GLIPR2Q9H4G4 154 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 KLHL31Q9H511 634 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 MVB12BQ9H7P6 319 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 P2RX2Q9UBL9 471 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 REV1Q9UBZ9 1251 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 MRPS17Q9Y2R5 130 aaKnown RBP10.06□□□□□ -0.8
CUX1-205ENST00000425244 ABCA7Q8IZY2 2146 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 HEATR5BQ9P2D3 2071 aa10.06□□□□□ -0.8
CUX1-205ENST00000425244 PRAMEF27A3QJZ7 478 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 ARRDC5A6NEK1 342 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 PDZK1P1A8MUH7 402 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 CCRL2O00421 344 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 FAAHO00519 579 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 C8orf89P0DMQ9 161 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 ERGP11308 486 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 PPP2R1BP30154 601 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 SOX6P35712 828 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 HSD17B2P37059 387 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 KCNJ5P48544 419 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 GPR19Q15760 415 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 OR4C11Q6IEV9 310 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 PGBD2Q6P3X8 592 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 SYT13Q7L8C5 426 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 RAB42Q8N4Z0 105 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 PARP16Q8N5Y8 322 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 OR8K5Q8NH50 307 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 JPH3Q8WXH2 748 aaPredicted RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 MSANTD3Q96H12 275 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 NECAB3Q96P71 396 aaPredicted RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 MENTQ9BUN1 341 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 APOOQ9BUR5 198 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 FNDC11Q9BVV2 318 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 NUAK2Q9H093 628 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 RERGLQ9H628 205 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 TBC1D17Q9HA65 648 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 GIN1Q9NXP7 522 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 CNOT2Q9NZN8 540 aaKnown RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 MGAT4BQ9UQ53 548 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 KLHL20Q9Y2M5 609 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 ZDBF2Q9HCK1 2354 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 KMOO15229 486 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 ERI3O43414 337 aaKnown RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 DDX5P17844 614 aaKnown RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 LASP1Q14847 261 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms