RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MARCH1Q8TCQ1 289 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ASB5Q8WWX0 329 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 NRGNQ92686 78 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 LHX4Q969G2 390 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FKBP10Q96AY3 582 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SH3YL1Q96HL8 342 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF578Q96N58 590 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TESK2Q96S53 571 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 COPS8Q99627 209 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 GFI1Q99684 422 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PRMT1Q99873 361 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TUBGCP2Q9BSJ2 902 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 MED10Q9BTT4 135 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ALG8Q9BVK2 526 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TSSK1BQ9BXA7 367 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SLC2A11Q9BYW1 496 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PANK2Q9BZ23 570 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SLC29A3Q9BZD2 475 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PRRG3Q9BZD7 231 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FAM124BQ9H5Z6 455 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SLA2Q9H6Q3 261 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PPP1R3EQ9H7J1 279 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 Q9N2K0 584 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 RAB18Q9NP72 206 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CCNB1IP1Q9NPC3 277 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ADAP2Q9NPF8 381 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 NOX4Q9NPH5 578 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PXMP2Q9NR77 195 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 GAR1Q9NY12 217 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CISD1Q9NZ45 108 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 RCC2Q9P258 522 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PSORS1C1Q9UIG5 152 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 IKZF2Q9UKS7 526 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TTC7AQ9ULT0 858 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CFL2Q9Y281 166 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 NFE2L3Q9Y4A8 694 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TRAV18A0A075B6X5 111 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 A0A0A6YYH2 397 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 A0A1B0GUA9 196 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 MTMR11A4FU01 709 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 A6NJ64 397 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CENPBD1B2RD01 187 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 P2RY10O00398 339 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 RAD51BO15315 384 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 EIF3HO15372 352 aaKnown RBP eCLIP3.39□□□□□ -1.874e-7■■□□□ 14.5
SF3B1-205ENST00000424674 RS1O15537 224 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 HSPA12AO43301 675 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 COCHO43405 550 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SLC28A2O43868 658 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SCN2BO60939 215 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 MT-ND2P03891 347 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PRKCGP05129 697 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LCKP06239 509 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 FCER2P06734 321 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 MMP3P08254 477 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 KRT7P08729 469 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ALOX5P09917 674 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 OCMP0CE72 109 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 HAPLN1P10915 354 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 FGF5P12034 268 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 B4GALT1P15291 398 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 NAGAP17050 411 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 EIF2S2P20042 333 aaKnown RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 MMP11P24347 488 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 STOMP27105 288 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PSMB6P28072 239 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PCK1P35558 622 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 OR3A3P47888 321 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 HSPA13P48723 471 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ARRB1P49407 418 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 HERVK_113P63132 956 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ERVK-8P63133 956 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CDK16Q00536 496 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PSG6Q00889 435 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LGALS3BPQ08380 585 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 IFFO1Q0D2I5 559 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SLC10A2Q12908 348 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PMS2P3Q13401 168 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ART3Q13508 389 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CRMP1Q14194 572 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 GRB14Q14449 540 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 MFSD13AQ14CX5 517 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SYPL1Q16563 259 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 C18orf21Q32NC0 220 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DNAL1Q4LDG9 190 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SYT14P1Q58G82 188 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 XKR4Q5GH76 650 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LIPNQ5VXI9 398 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 FRG2Q64ET8 278 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF470Q6ECI4 717 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LCN10Q6JVE6 187 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 FUT10Q6P4F1 479 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 VITQ6UXI7 678 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 GCNT7Q6ZNI0 430 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PLEKHG7Q6ZR37 379 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 Q6ZWC4 215 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CYP4V2Q6ZWL3 525 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SLC35D2Q76EJ3 337 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DPY19L4Q7Z388 723 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms