RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 RELL1Q8IUW5 271 aa14.75□□□□□ -0.05
COL18A1-205ENST00000423214 FAM83FQ8NEG4 500 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-205ENST00000423214 ABTB1Q969K4 478 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-205ENST00000423214 KLHL29Q96CT2 875 aa14.75□□□□□ -0.05
COL18A1-205ENST00000423214 TRIM44Q96DX7 344 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-205ENST00000423214 NSUN5Q96P11 429 aaKnown RBP14.75□□□□□ -0.05
COL18A1-205ENST00000423214 TMUB1Q9BVT8 246 aa14.75□□□□□ -0.05
COL18A1-205ENST00000423214 LIME1Q9H400 295 aa14.75□□□□□ -0.05
COL18A1-205ENST00000423214 MAPRE3Q9UPY8 281 aa14.75□□□□□ -0.05
COL18A1-205ENST00000423214 DTX4Q9Y2E6 619 aa14.75□□□□□ -0.05
COL18A1-205ENST00000423214 MBD3L4A6NDZ8 208 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-205ENST00000423214 MBD3L3A6NE82 208 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-205ENST00000423214 TUBAL3A6NHL2 446 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 MBD3L5A6NJ08 208 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-205ENST00000423214 CD8B2A6NJW9 211 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 ACOX3O15254 700 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 OTCP00480 354 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 ATP1B1P05026 303 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 ABCB1P08183 1280 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-205ENST00000423214 CYP4B1P13584 511 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 BMP7P18075 431 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 CTSSP25774 331 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 PTPN6P29350 595 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 OPRM1P35372 400 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 FEN1P39748 380 aaKnown RBP14.74□□□□□ -0.05
COL18A1-205ENST00000423214 ALDH9A1P49189 494 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 EXOSC7Q15024 291 aaKnown RBP14.74□□□□□ -0.05
COL18A1-205ENST00000423214 PRICKLE4Q2TBC4 344 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 TIGD3Q6B0B8 471 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 SLC30A6Q6NXT4 461 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 PAMR1Q6UXH9 720 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 METTL4Q8N3J2 472 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 CEP112Q8N8E3 955 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 OR4F6Q8NGB9 312 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 MBD3L2Q8NHZ7 208 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-205ENST00000423214 SLC44A1Q8WWI5 657 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 OMA1Q96E52 524 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 DTNBP1Q96EV8 351 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 WDYHV1Q96HA8 205 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 ALPK1Q96QP1 1244 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 FAIM2Q9BWQ8 316 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 TSPYL1Q9H0U9 437 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 ZBTB26Q9HCK0 441 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 PFDN4Q9NQP4 134 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 MAT2BQ9NZL9 334 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 NFU1Q9UMS0 254 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 PCDHA9Q9Y5H5 950 aa14.74□□□□□ -0.05
COL18A1-205ENST00000423214 H0Y3Z8 333 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 SNPHO15079 494 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 ERN1O75460 977 aaKnown RBP14.73□□□□□ -0.05
COL18A1-205ENST00000423214 ACTL6AO96019 429 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 RHOXF2BP0C7M4 288 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 TMIGD3P0DMS9 266 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-205ENST00000423214 NAGAP17050 411 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 CSNK2A2P19784 350 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-205ENST00000423214 CNTFP26441 200 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 AGFG1P52594 562 aaKnown RBP14.73□□□□□ -0.05
COL18A1-205ENST00000423214 SORDQ00796 357 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 TMEM81Q6P7N7 255 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 FAM111BQ6SJ93 734 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 NUP54Q7Z3B4 507 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 YRDCQ86U90 279 aaKnown RBP14.73□□□□□ -0.05
COL18A1-205ENST00000423214 ADCY4Q8NFM4 1077 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 OR14L1PQ8NHC6 308 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 TRPC4APQ8TEL6 797 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 SELENOMQ8WWX9 145 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 LCORQ96JN0 433 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-205ENST00000423214 PAFAH2Q99487 392 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 FUT8Q9BYC5 575 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 EPB41L4BQ9H329 900 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 CALHM2Q9HA72 323 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 GALNT9Q9HCQ5 603 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 NMRK1Q9NWW6 199 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 EHD3Q9NZN3 535 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 PSME2Q9UL46 239 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 SNX6Q9UNH7 406 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 PLLPQ9Y342 182 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 ZNF780BQ9Y6R6 833 aa14.73□□□□□ -0.05
COL18A1-205ENST00000423214 PRAMEF25A6NGN4 478 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 ESRRBO95718 433 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 PDYNP01213 254 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 RAF1P04049 648 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 RPS17P08708 135 aaKnown RBP14.72□□□□□ -0.05
COL18A1-205ENST00000423214 CPA2P48052 419 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 SERPINB9P50453 376 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 NAGLUP54802 743 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 MAP4K2Q12851 820 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 SNTA1Q13424 505 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 KRTAP21-3Q3LHN1 58 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 POMZP3Q6PJE2 187 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 ENPP6Q6UWR7 440 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 RPS27LQ71UM5 84 aaKnown RBP14.72□□□□□ -0.05
COL18A1-205ENST00000423214 CAMKMTQ7Z624 323 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 MMP21Q8N119 569 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 OR52R1Q8NGF1 315 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 HGDQ93099 445 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 ISL2Q96A47 359 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 POM121Q96HA1 1249 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 NODALQ96S42 347 aa14.72□□□□□ -0.05
COL18A1-205ENST00000423214 RHOXF2Q9BQY4 288 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms