RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 BCHEP06276 602 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 CD8BP10966 210 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 CELP19835 753 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 RFX3P48380 749 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 SRP9P49458 86 aaKnown RBP10.11□□□□□ -0.79
USP54-204ENST00000422491 LSM11P83369 360 aaKnown RBP eCLIP10.11□□□□□ -0.79
USP54-204ENST00000422491 SEMG2Q02383 582 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 TAP2Q03519 686 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 CRYZQ08257 329 aaKnown RBP10.11□□□□□ -0.79
USP54-204ENST00000422491 RIPPLY1Q0D2K3 151 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 COX10Q12887 443 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 SLC36A2Q495M3 483 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 PLEKHS1Q5SXH7 462 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 PODNL1Q6PEZ8 512 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 SERPINA13PQ6UXR4 307 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 COMMD6Q7Z4G1 85 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 LHFPL3Q86UP9 236 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 SRFBP1Q8NEF9 429 aaKnown RBP10.11□□□□□ -0.79
USP54-204ENST00000422491 OR2T4Q8NH00 348 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 SMG7Q92540 1137 aaKnown RBP10.11□□□□□ -0.79
USP54-204ENST00000422491 C1QTNF6Q9BXI9 259 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 KIF25Q9UIL4 384 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 A4GNTQ9UNA3 340 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 OR51B4Q9Y5P0 310 aa10.11□□□□□ -0.79
USP54-204ENST00000422491 TMEM189-UBE2V1I3L0A0 370 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 INPPL1O15357 1258 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 EEF1E1O43324 174 aaKnown RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 STC2O76061 302 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 EIF4EP06730 217 aaKnown RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 EPHX1P07099 455 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ZNF273Q14593 569 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 TUSC1Q2TAM9 212 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 FAM71E1Q6IPT2 247 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 SLC36A4Q6YBV0 504 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 OAFQ86UD1 273 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 GPR135Q8IZ08 494 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ZNF649Q9BS31 505 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 RBCK1Q9BYM8 510 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 PLA2G12AQ9BZM1 189 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 LINC00597Q9H2U6 94 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ZC4H2Q9NQZ6 224 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 SCP2D1Q9UJQ7 156 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 GPR52Q9Y2T5 361 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 A0A1W2PRB8 838 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 MFSD2BA6NFX1 497 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ARHGEF33A8MVX0 844 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 RBMS1P29558 406 aaKnown RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 SMSP52788 366 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 VSX2P58304 361 aaPredicted RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 RAB8AP61006 207 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 RPS26P62854 115 aaKnown RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 ACSM1Q08AH1 577 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 PIN1Q13526 163 aaPredicted RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 NAE1Q13564 534 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 NDUFA9Q16795 377 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ST3GAL2Q16842 350 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 GSG1Q2KHT4 349 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 HSD17B12Q53GQ0 312 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ADGRF1Q5T601 910 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 IDNKQ5T6J7 187 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 TFAP2EQ6VUC0 442 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ZNF783Q6ZMS7 281 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 RFLNAQ6ZTI6 216 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 CHMP1BQ7LBR1 199 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 LRRC56Q8IYG6 542 aaPredicted RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 PIAS4Q8N2W9 510 aaPredicted RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 HORMAD2Q8N7B1 307 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 C16orf78Q8WTQ4 265 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 WBP2Q969T9 261 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 MARC2Q969Z3 335 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 MED8Q96G25 268 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 TMEM19Q96HH6 336 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ZNF354BQ96LW1 612 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ABHD1Q96SE0 405 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 AP5M1Q9H0R1 490 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 A4GALTQ9NPC4 353 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 GKN1Q9NS71 199 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 ASB6Q9NWX5 421 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 PRG3Q9Y2Y8 225 aaPredicted RBP10.1□□□□□ -0.79
USP54-204ENST00000422491 NPTNQ9Y639 398 aa10.1□□□□□ -0.79
USP54-204ENST00000422491 A0A1W2PRG6 482 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 A0A1W2PRQ8 180 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 FAM170BA6NMN3 283 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 KDM4EB2RXH2 506 aaPredicted RBP10.09□□□□□ -0.79
USP54-204ENST00000422491 M0R233 179 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 THBS2P35442 1172 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 SLC6A11P48066 632 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 KCNJ5P48544 419 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 PITPNBP48739 271 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 ZP1P60852 638 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 C2orf80Q0P641 193 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 IRF5Q13568 498 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 NHLRC3Q5JS37 347 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 HBMQ6B0K9 141 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 BHLHB9Q6PI77 547 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 AGTRAPQ6RW13 159 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 CRTC1Q6UUV9 634 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 IL20RBQ6UXL0 311 aa10.09□□□□□ -0.79
USP54-204ENST00000422491 KRT74Q7RTS7 529 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms