RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 C16orf58Q96GQ5 468 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 SPACA7Q96KW9 195 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 GUCD1Q96NT3 240 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 ALPK1Q96QP1 1244 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 CD180Q99467 661 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 DGCR6LQ9BY27 220 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 DUSP15Q9H1R2 295 aaPredicted RBP8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 POLR1BQ9H9Y6 1135 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 VCX3AQ9NNX9 186 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 FAM60AQ9NP50 221 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 CCNB1IP1Q9NPC3 277 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 PLCXD1Q9NUJ7 323 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 TMEM74BQ9NUR3 256 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 RLIMQ9NVW2 624 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 PAK1IP1Q9NWT1 392 aaPredicted RBP8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 FTSJ1Q9UET6 329 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 NDOR1Q9UHB4 597 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 A4GNTQ9UNA3 340 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 SATB2Q9UPW6 733 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 MGAT4BQ9UQ53 548 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC9A8Q9Y2E8 581 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 SH3GLB1Q9Y371 365 aa8.49□□□□□ -1.05
LINCMD1-201ENST00000418518 UNC13CQ8NB66 2214 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 TRBV4-1A0A0J9YWV2 114 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 FITM1A5D6W6 292 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 TLCD2A6NGC4 264 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ZAR1LA6NP61 321 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PCDH17O14917 1159 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 AQP9O43315 295 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 HCRTR1O43613 425 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 FGF17O60258 216 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 DNAJB6O75190 326 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 WBP4O75554 376 aaKnown RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PIAS2O75928 621 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ZIC2O95409 532 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 H1F0P07305 194 aaKnown RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ACP2P11117 423 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CYP4B1P13584 511 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 FOSL2P15408 326 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 TYRP1P17643 537 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 GABRB1P18505 474 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 FUT4P22083 530 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 RPS4Y1P22090 263 aaKnown RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CDH3P22223 829 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ACVR2AP27037 513 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 HOXA6P31267 233 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PRKAR1BP31321 381 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC5A2P31639 672 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PTGER1P34995 402 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 EMP3P54852 163 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 VSX2P58304 361 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SKP1P63208 163 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SIM1P81133 766 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 IL5RAQ01344 420 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 RPL6Q02878 288 aaKnown RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PMS2P3Q13401 168 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 FAM53BQ14153 422 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 NR1D2Q14995 579 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 NPTX1Q15818 432 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ARHGAP11BQ3KRB8 267 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CYP27C1Q4G0S4 372 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 C14orf28Q4W4Y0 310 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ATAD3BQ5T9A4 648 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 GARNL3Q5VVW2 1013 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CD300LDQ6UXZ3 194 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 FRRS1Q6ZNA5 592 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 MED25Q71SY5 747 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SZRD1Q7Z422 152 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF761Q86XN6 746 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 LACC1Q8IV20 430 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 MCATQ8IVS2 390 aaKnown RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC44A2Q8IWA5 706 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ENTHD1Q8IYW4 607 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 TAGAPQ8N103 731 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 TMEM52Q8NDY8 209 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 OR9Q2Q8NGE9 314 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 RHOXF1Q8NHV9 184 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CNIH3Q8TBE1 160 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 LMX1AQ8TE12 382 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 APH1BQ8WW43 257 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 IPCEF1Q8WWN9 437 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 KAT2AQ92830 837 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PMM1Q92871 262 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ANKRD9Q96BM1 317 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CTHRC1Q96CG8 243 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC35A4Q96G79 324 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 TCTN2Q96GX1 697 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PRRC1Q96M27 445 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 HSPA12BQ96MM6 686 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 STACQ99469 402 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 NIPSNAP1Q9BPW8 284 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CCDC3Q9BQI4 270 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SAP130Q9H0E3 1048 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 KLHL25Q9H0H3 589 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ADNPQ9H2P0 1102 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 PIGUQ9H490 435 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ANKRD19PQ9H560 264 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 ERVMER34-1Q9H9K5 563 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 NMNAT1Q9HAN9 279 aaPredicted RBP8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 DUSP22Q9NRW4 184 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms